Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00122 ATGACGAAGCTTGCAGGATATTCCCTGGCTGTTTCATTTGCTCCCATAAGTTGCAATATCCTTAAAAACAATTGCAGATTCCCATTAGTTATATCTCTCAGGAATAAGTTCAGCTGTAGGTTATTTTCTACTCATGCTCTGAAAGCACAGTTACATGATAAGCCTGGAGCGGTTTCCAGATACTATCTTCCTCCTTGGTTTAGTGTTGCTCCAATGATGGAATGGACGGACAATCACTATAGGACTCTAGCACGCCTCATATCAAAACATGCTTGGCTTTACACGGAGATGGTTGCAGCTGAAACAATTGTTCATCAAAAAGACAATCTGGACAGATTCTTGGCATATTCTCCAGACCAACATCCCATAGTGCTTCAAATCGGAGGGAGTAATATAGAAAATTTGGCTAAAGCAACTGAGCTTGCTAATGCTTATTGCTATGACGAGATCAACTTAAACTGTGGATGCCCTAGTCCAAAAGTTGCTGGGCATGGGTGTTTCGGTGTGAGTCTTATGCTTAACCCCAAGGAAAGTTTGTTGCGGAGGCCATGTCAGCAATTGCTGCCAGCACAAATGTTCCTGTCAGTGTCAAATGTCGAATTGGCGTGGATGATCATGATTCTTATAATGAGCTTTGTTTCTTCTTTATCACCTACTAAGCATTTTATAATTCACTCAAGGAAGGCACTGCTCAATGGTATTAGCCCTGCTGAGAATAGGAGCATTCCTCCGCTAAAATATGAATACTTCTACGGCCTCCTACGTGACTTTCCTGACCTTACATTTACAATCAATGGCGGCATTACTAGTGTTGAAGAGGTCATTGCGTCTCAAGAAGCCGGGGCTCATGGTGCTATGGTTGGACGTGCAGCCTACAACAACCCTTGGCATATTTTGGGACACGTAGATTCCGCAATTTATGGTACACCAAGCAGTGGTCTTACACGTCGTCAGGTGCTTAAAAGATATCTGGCCTATGGGGAGTCGGTCATGGGAAAATATGGACGTAGGCCAACTATGCGAGATATTGTAAAGCCTTTACTCAATCTTTTCCATTCAGAACCTGGGAATGGACTTTGGAAGCGCAAAGCTGATGCTGCTTTCAAAAATTGCTCGACTGTGGAATCATTTTTTGAAGAAACCCTTGTGGCAATTCCCGACTCAGTATTGGATTCGCCTGTTACCAAACTACCACCTGGCCGTAGAGATCTTTTTGCCAACATACACAATTTATTGCCTCCGCCATACAGAACAGGAGAAGAAGCAGTAGTCATTTGCGCTTAA 1284 0.433 MTKLAGYSLAVSFAPISCNILKNNCRFPLVISLRNKFSCRLFSTHALKAQLHDKPGAVSRYYLPPWFSVAPMMEWTDNHYRTLARLISKHAWLYTEMVAAETIVHQKDNLDRFLAYSPDQHPIVLQIGGSNIENLAKATELANAYCYDEINLNCGCPSPKVAGHGCFGVSLMLNPKESLLRRPCQQLLPAQMFLSVSNVELAWMIMILIMSFVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVEEVIASQEAGAHGAMVGRAAYNNPWHILGHVDSAIYGTPSSGLTRRQVLKRYLAYGESVMGKYGRRPTMRDIVKPLLNLFHSEPGNGLWKRKADAAFKNCSTVESFFEETLVAIPDSVLDSPVTKLPPGRRDLFANIHNLLPPPYRTGEEAVVICA* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00122 427 Gene3D Aldolase class I 63 300 IPR013785 -
Phac11g00122 427 Gene3D - 311 376 - -
Phac11g00122 427 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 60 420 IPR004653 GO:0002943|GO:0017150
Phac11g00122 427 SUPERFAMILY FMN-linked oxidoreductases 66 363 - -
Phac11g00122 427 CDD DUS_like_FMN 67 296 IPR035587 -
Phac11g00122 427 Pfam Dihydrouridine synthase (Dus) 69 176 IPR035587 -
Phac11g00122 427 Pfam Dihydrouridine synthase (Dus) 220 373 IPR035587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00122 Phac-Chr11 808128 814171 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00122 K05539 - gmx:100779457 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g00122 11 808128 814171 Phac11g00122 11 808128 814171 ECH