Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00014 ATGAGTGAGAGTAACGGGAACAGCAGGAGGCGAAATGTTGAAGATCAAGATCTGGGACTCTACTTCTTAGAAGCGTGCAGGGGTAGGGAGATGAAAGAGAGGGAGAAGGAGAAGGTCAAAGAGGAAGAGGAGGAAGAGGAGGAGCCGCCGAGGGAGCTCAACACGATTAACAGCTCCGGTGGCTTCGTGGTGGTCTCCACGGACAAGCTGTCGGTGAAGTACACCAACGTCAACCTTCACGGCCACGACGTCGGTGTCATTCAGGCCAACAAGCCTGCTCCTACCAAACGCCTCATCTACTATTTTGAGATTCACGTCAAGGATGCCGGCGTCAAGGGTCAAATTGCCATTGGCTTCACCTCCGAGACATTCAAGATGCGAAGGCAGCCAGGGTGGGAGGCCAATAGCTGCGGCTATCATGGTGACGATGGTCTTCTTTACCGTGGACATGGCAAGGGGGAAGCGTTTGGCCCAACCTATACATCTGGTGATGTAGTTGGTGCCGGAATTAACTACGCTGCGCAGGAATTCTTTTTCACTAAAAATGGCCAAGTTGTCGGCTCTGTTTACAAAGACATGAAAGGTCCCCTTTTTCCTACTATTGCAGTTCATAGCCAAAATGAAGAGGTGCATGTCAACTTTGGGCAGAAACCATTTACTTTTGACTTAAAAGAATTTGAAGCACAGGAAAGAATGAAGCAGCAACTGAAAATAGAGGAAATTTCTGTGCCACCAAATGTCAGTTACGGAATTGTCCGCTCCTACCTGCTTCACTATGGATATGAAGATACATTGAATTCATTTGATGTGGCTAGTAAAAGTACTGTTCCTCCTATATACATAGCTCAAGAAAGTGGAATTGATGAGCAGGAAATTACATATGCGTTAAGTCATAGAAAGACTCTTCGGCAGCTAATCAGGAAAGGGGACCTTGATGTTGCATTTGGTAAATTGCGCGAATGGTATCCACAAATTGTTGAGGACAACACGTCAGCTACATGCTTTCTGCTTCATTGTCAACATTTTATCGAATTAGTTCGGGTTGGAGCTCTTGAGGAGGCAGTCAGATATGGAAGAATAGAATTATCGAGTTTTTATGACTTGCCTGTCTTTAAGGATTTAGTTCAGGACTGTGTTGCTTTGCTGGCATATGAACGGCCTCTAGAATCTTCCGTAGGCTATCTTCTAAAAGACTCGCAGCGAGAAGTTGTAGCTGACACGGTAAATGCCATGATTTTGTCCACAAATCCCAATATGAAAGAATCAAAACATTGCTTGCAGTCCTATCTGGAGAGGTTACTTAGACAGCTCACTGCTTGCTGCTTAGAGAGACGAGCACTGAATGGAGAGCAGGGAGAAGCTTTCCAACTTCAGAGATTACTTAGCAGTAGTAGAAGAGGCTAG 1404 0.4566 MSESNGNSRRRNVEDQDLGLYFLEACRGREMKEREKEKVKEEEEEEEEPPRELNTINSSGGFVVVSTDKLSVKYTNVNLHGHDVGVIQANKPAPTKRLIYYFEIHVKDAGVKGQIAIGFTSETFKMRRQPGWEANSCGYHGDDGLLYRGHGKGEAFGPTYTSGDVVGAGINYAAQEFFFTKNGQVVGSVYKDMKGPLFPTIAVHSQNEEVHVNFGQKPFTFDLKEFEAQERMKQQLKIEEISVPPNVSYGIVRSYLLHYGYEDTLNSFDVASKSTVPPIYIAQESGIDEQEITYALSHRKTLRQLIRKGDLDVAFGKLREWYPQIVEDNTSATCFLLHCQHFIELVRVGALEEAVRYGRIELSSFYDLPVFKDLVQDCVALLAYERPLESSVGYLLKDSQREVVADTVNAMILSTNPNMKESKHCLQSYLERLLRQLTACCLERRALNGEQGEAFQLQRLLSSSRRG* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00014 467 CDD SPRY_RanBP_like 85 215 IPR044736 -
Phac11g00014 467 SMART SPRY_3 97 218 IPR003877 GO:0005515
Phac11g00014 467 PANTHER RAN BINDING PROTEIN 9-RELATED 49 443 - -
Phac11g00014 467 SUPERFAMILY Concanavalin A-like lectins/glucanases 57 221 IPR013320 -
Phac11g00014 467 MobiDBLite consensus disorder prediction 32 57 - -
Phac11g00014 467 ProSiteProfiles B30.2/SPRY domain profile. 31 219 IPR001870 -
Phac11g00014 467 SMART toby_final6 349 450 IPR013144 -
Phac11g00014 467 Gene3D - 26 235 IPR043136 -
Phac11g00014 467 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 295 353 IPR006595 -
Phac11g00014 467 FunFam Ran-binding protein M homolog 25 229 - -
Phac11g00014 467 Pfam SPRY domain 99 216 IPR003877 GO:0005515
Phac11g00014 467 Pfam CTLH/CRA C-terminal to LisH motif domain 298 440 IPR024964 -
Phac11g00014 467 SMART ctlh 295 353 IPR006595 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00014 K23334 - gmx:100805319 845.884