Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01934 ATGGATGGGAATTTCACCAGAAGCATAAGCAGGAGCATAAGCAGATCAAGTTGGAAAATGGAGGAAGTGTTTGCCAGTGGAAGGTATTCTCGCAGAACTTCTCAAGTAGATGAGGATGAGGAGGCTCTCAAATGGGCTGCCATAGAGAAACTCCCCACCTATGATAGGCTAAGGACGAGCATCATCCAAACCTTTGCCGAGGGTGGTGATCAACAACCTGGTAACCAAATTCTGCACAAGGAAATTGATGTTCGCAAGCTGGACATGAATGATAGGCAGCAAATCATTGACAAGATTTTCAAGGTTGCTGAAGAAGACAATGAAAAGTTCCTCAGGAAGTTCAGAAACAGAACTGACAAGGTCGGGATCAGACTTCCAACAGTAGAAGTGAGGTTCCAAAATTTGACTGTTGAGGCAAATTCCTTTGTCGGCAGCAGAGCTCTGCCAACCCTGCCAAACTCTGCATTGAACATTCTTGAATCATTTTTTGGTATTTTTGGGATTAGTACAGCTAAGAGGACAAAGCTCACTATTCTTAAGAATGCCTTTGGCATTGTTAAACCATCAAGGATGGCCCTTTTATTAGGTCCCCCATCTTCAGGGAAAACGACCCTTTTGTTGGCATTGGCCGGAAAGTTGGACCCTGAATTGAGGGTAAAAGGAGAAATCACTTACAATGGACACAAACTTGATGAGTTTGTGCCAAGAAAGACTTCAGCATATATTAGCCAAAATGATGTTCATGTTGGAGAAATGACTGTAAAAGAAACACTGGATTTCTCAGCTAGATGTCTAGGAGTAGGGACTAGATATGATCTATTAACGGAGCTTGCTAGAAGGGAAAAGGAAGCTGGCATATTTCCAGAAGCAGATGTTGACCTTTTCATGAAGGCCACTGCAATGGAAGGAACAGAAAGCAGTCTCATCACCGACTACACACTCAAAATATTGGGGCTTGATATTTGCAAGGACACCATAGTGGGTGATGAAATGCACAGAGGTGTATCAGGTGGCCAAAAGAAGCGTGTTACCACAGGAGAGATGATTGTTGGGCCCACAAAAACACTATTCATGGATGAAATATCAACGGGTCTTGATAGTTCCACAACTTTTCAGATTGTGAAGTGCTTGCAGCAGATTGTGCACCTCACTGAAGCAACTATCTTAATGTCCCTTCTTCAACCTGCTCCTGAGACTTTCAATCTCTTTGATGACATCATCCTCATTTCTGAGGGTCAGATTGTGTACCAAGGTCCACGTGAACACATCGTGGAATTCTTTGAGTCATGTGGGTTTCGCTGTCCCGAAAGAAAGGGAACCGCTGATTTCTTGCAAGAGGTTACCTCAAGGAAGGACCAGGAGCAATACTGGGCAGACAAAAACAAACCATACCGTTATGTTACAGTGACAGAGTTTGCAAACAAGTTCAAGCGGTTCCATGTTGGAATGAGGCTTGAGAGTGAGTTATCTGTTCCATTTGATAAGTCAAGTGCACATAAAGCAGCTCTTGTATACAGTAAAAGCTCTGTGCCCACAATGGATCTTTTTAAAGCATGTTGGGACAAGGAGTGGCTGCTGATTAAGAGGAACTCCTTCGTCTACATATTCAAGACAGTCCAAATTATCATCATTGCCATCATATCTGCAACATTGTTCTTGAGGACTGAAATGCACCAAGATACTGAAGATGGTGCATCACTTTACATTGGGGCAATTTTGTTCTCTATGATCATGAACATGTTTAATGGTTTTGCTGAGCTAGCACTCACAATTGGAAGGCTTCCCGTGTTTTACAAGCACAGAGACCATCTTTTCCACCCTGCTTGGACTTACACCCTCCCCAATTTCTTGCTGCGTATTCCCATATCTATTTTTGAGTCTCTTGTTTGGGTTGGTGTCACCTACTACACCATAGGATTTGCTCCTGAAGCTAGCAGGTTCTTCAAGCAATTGTTGGTGGTGTTTCTCATCCAACAAATGGCAGCTGGGATGTTTAGGGTCATTTCTGGAGTGTGCAGGACAATGATTATAGCTAACACTGGCGGAGCTCTCATGCTCCTTCTTATTTTTCTACTTGGAGGTTTCATCCTTCCCAAACGTGAAATTCCTCCTTGGTGGGTGTGGGCTTACTGGGTGTCACCATTGACATATGCCTTCAATTCCTTGGCTGTGAATGAAATGTTTGCTCCAAGGTGGATGCATCCACAGACATCATCGGATAAAACTACCACATTGGGTCTATCAGTGCTAAGAAACTTTGATGTTTTTGCTAAAGAAGAATGGTACTGGATAGGAGCCGCTGCTCTTTTTGGTTATACCATTTTCTACAATGTTCTCTTCACCCTTGCACTCATGTACCTTAACCCTCTTGGAAAGAAACAAGCAATTATTTCTGAGGAAGATGCAAGTGAAATGGAGACTGGAGGAGACACCAACGAAGAACCTAGACTTGTAAGGCCCCCACAGTCCAACAAAGATTCAATGTTTCGATCATTATCTACTGCTGATGGAAATAATTCAAGAGAAGTGGCAATGCAGAGAATGGGTAGCCAAGCTACCAGTGGACTAAGAAAAGTTGATTCAGCAAATGATTCAGCAACTGGAGTTGCCCCCAAAAGAGGAATGATTCTACCTTTTCAACCACTTGCAATGTCCTTTGACACTGTTAATTACTACGTCGACATGCCTGCAGAAATGAAAGCACAAGGAGTGGCTGAAGATAGGCTGCAACTGCTTAGGGGAGTAACCAGTTCCTTTAGGCCTGGAGTCCTAACTGCACTAATGGGAGTTAGTGGAGCTGGGAAGACAACTTTAATGGATGTTTTAGCAGGAAGAAAAACTGGTGGCTACGTTGAAGGAGATATTAGAATCTCTGGGTTTCCCAAGAACCAAGAAACCTTTGCAAGAGTTGCTGGTTACTGCGAACAAACTGATATTCATTCACCCCAAGTTACTATTCGTGAATCTTTGATTTACTCTGCTTTCCTCCGTTTACCAAAAGAAGTTAGTGATGAGGAAAAAATTCAATTTGTGGACCAAGTGATGGATTTGGTAGAGCTGGATAATCTGAAGGATGCTATAGTGGGGCTTCCAGGAGTTACAGGGTTGTCAACAGAGCAAAGAAAGAGGTTGACCATTGCTGTTGAGCTTGTTGCTAATCCTTCAATCATTTTCATGGATGAACCAACTTCAGGACTTGATGCAAGAGCAGCAGCTATTGTTATGAGGACTGTGAGAAACACTGTGGACACGGGAAGAACAGTTGTTTGCACAATTCACCAGCCTAGCATTGATATCTTTGAAGCCTTCGATGAGCTTTTGTTGATGAAAAGAGGAGGGCAAGTGATCTACTCGGGACCATTAGGCCGAAATTCCCACAAGATTATAGAATACTTTGAGGCAATTCCAGGTGTTCCAAAAATTAAAGAGATGTACAACCCAGCCACATGGATGCTAGAAGTGAGTTCTGTAGCAGCTGAAGTTAGGCTTGGAATGGACTTTGCTGAATACTACAGTTCTTCATCTTTGTTTCAACGAAACAAAGCCCTTGTGAAGGAGCTAAGCACACCTCCACCTGGAACTACTGATTTGTATTTCCCCACTAAATACTCTCAATCTGCACTGGGGCAATTCAAATCCTGTTTCTGGAAGCAGTGGTTGACCTACTGGAGGAGCCCAGATTATAATCTTGTCAGATTCTTTTTCACCTTGGCTAGTGCCCTCATGATAGGGACAATATTTTGGAGAATTGGCGGAAATAGGGACAACTCAAGCGACCTTACAATGATCATTGGAGCAATGTATGCGGCTGTTATTTTTGTTGGCATCAACAACTGCCAAACTGTTCAACCAATAGTAGCAGTTGAAAGAACAGTGTTCTATAGAGAAAGAGCTGCTGGAATGTATGCTCCTCTGCCTTATGCCCTCGCACAGGTTTTTGCTGAAATACCGTATGTATTTGTCCAAGCTGTGTATTACTCACTCCTAATCTATGCCATGGTGAACTTTGAATGGAAAGTGGAGAAGTTCTTTTGGTTCTTCTTTGTCAGCTTCTTCTCTTTCTTGTACTTCACATATTATGGGATGATGACTGTTTCCATCACACCAAACCACCAAGTGGCATCAATCTTTGCAGCAGCATTCTATGGACTCTTCAATCTCTTCTCTGGTTTCTTCATCCCAAGACCCAAAATTCCTAAGTGGTGGGTGTGGTATTACTGGATTTGTCCAGTGGCATGGACAGTGTATGGATTAATTATCTCTCAATATAGAGACATAGAGGACCCAATTTCTGTGCAAGGAAGTACCATAAATTTCACTGTTAGAGGATATATTGAAGACCACTACGGATTTAAACCAGACTTCATGGGTCCAGTTGCTGCAGTTTTGGTGGCTTTCACTGTCTTCTTTGCCTTTGTGTTTTCCTTCTGCATCAAGACACTGAACTTCCAATCAAGATAA 4461 0.4275 MDGNFTRSISRSISRSSWKMEEVFASGRYSRRTSQVDEDEEALKWAAIEKLPTYDRLRTSIIQTFAEGGDQQPGNQILHKEIDVRKLDMNDRQQIIDKIFKVAEEDNEKFLRKFRNRTDKVGIRLPTVEVRFQNLTVEANSFVGSRALPTLPNSALNILESFFGIFGISTAKRTKLTILKNAFGIVKPSRMALLLGPPSSGKTTLLLALAGKLDPELRVKGEITYNGHKLDEFVPRKTSAYISQNDVHVGEMTVKETLDFSARCLGVGTRYDLLTELARREKEAGIFPEADVDLFMKATAMEGTESSLITDYTLKILGLDICKDTIVGDEMHRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQQIVHLTEATILMSLLQPAPETFNLFDDIILISEGQIVYQGPREHIVEFFESCGFRCPERKGTADFLQEVTSRKDQEQYWADKNKPYRYVTVTEFANKFKRFHVGMRLESELSVPFDKSSAHKAALVYSKSSVPTMDLFKACWDKEWLLIKRNSFVYIFKTVQIIIIAIISATLFLRTEMHQDTEDGASLYIGAILFSMIMNMFNGFAELALTIGRLPVFYKHRDHLFHPAWTYTLPNFLLRIPISIFESLVWVGVTYYTIGFAPEASRFFKQLLVVFLIQQMAAGMFRVISGVCRTMIIANTGGALMLLLIFLLGGFILPKREIPPWWVWAYWVSPLTYAFNSLAVNEMFAPRWMHPQTSSDKTTTLGLSVLRNFDVFAKEEWYWIGAAALFGYTIFYNVLFTLALMYLNPLGKKQAIISEEDASEMETGGDTNEEPRLVRPPQSNKDSMFRSLSTADGNNSREVAMQRMGSQATSGLRKVDSANDSATGVAPKRGMILPFQPLAMSFDTVNYYVDMPAEMKAQGVAEDRLQLLRGVTSSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVEGDIRISGFPKNQETFARVAGYCEQTDIHSPQVTIRESLIYSAFLRLPKEVSDEEKIQFVDQVMDLVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEMYNPATWMLEVSSVAAEVRLGMDFAEYYSSSSLFQRNKALVKELSTPPPGTTDLYFPTKYSQSALGQFKSCFWKQWLTYWRSPDYNLVRFFFTLASALMIGTIFWRIGGNRDNSSDLTMIIGAMYAAVIFVGINNCQTVQPIVAVERTVFYRERAAGMYAPLPYALAQVFAEIPYVFVQAVYYSLLIYAMVNFEWKVEKFFWFFFVSFFSFLYFTYYGMMTVSITPNHQVASIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIISQYRDIEDPISVQGSTINFTVRGYIEDHYGFKPDFMGPVAAVLVAFTVFFAFVFSFCIKTLNFQSR* 1487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01934 1486 Pfam ABC-transporter N-terminal 94 153 IPR029481 -
Phac10g01934 1486 SMART AAA_5 188 420 IPR003593 GO:0016887
Phac10g01934 1486 SMART AAA_5 921 1113 IPR003593 GO:0016887
Phac10g01934 1486 Gene3D - 898 1131 IPR027417 -
Phac10g01934 1486 CDD ABCG_PDR_domain1 172 418 IPR034001 -
Phac10g01934 1486 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 7 1486 - -
Phac10g01934 1486 Pfam ABC transporter 185 361 IPR003439 GO:0005524
Phac10g01934 1486 MobiDBLite consensus disorder prediction 824 861 - -
Phac10g01934 1486 Pfam ABC transporter 912 1064 IPR003439 GO:0005524
Phac10g01934 1486 CDD ABCG_PDR_domain2 881 1119 IPR034003 -
Phac10g01934 1486 Pfam ABC-2 type transporter 394 448 IPR043926 GO:0140359
Phac10g01934 1486 Pfam ABC-2 type transporter 1093 1153 IPR043926 GO:0140359
Phac10g01934 1486 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 884 1137 IPR003439 GO:0005524
Phac10g01934 1486 Pfam Plant PDR ABC transporter associated 732 797 IPR013581 -
Phac10g01934 1486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 907 1121 IPR027417 -
Phac10g01934 1486 FunFam ABC transporter G family member 40 898 1128 - -
Phac10g01934 1486 Gene3D - 166 479 IPR027417 -
Phac10g01934 1486 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 163 436 IPR003439 GO:0005524
Phac10g01934 1486 FunFam ABC transporter G family member 34 166 470 - -
Phac10g01934 1486 MobiDBLite consensus disorder prediction 801 867 - -
Phac10g01934 1486 Pfam ABC-2 type transporter 515 726 IPR013525 GO:0016020|GO:0140359
Phac10g01934 1486 Pfam ABC-2 type transporter 1210 1423 IPR013525 GO:0016020|GO:0140359
Phac10g01934 1486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 436 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01934 Phac-Chr10 41595922 41606315 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01934 K08711 - gmx:100798588 2690.6