Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01917 ATGGGGAGCTCTGAAGGGTTGGGGGCATCGTCGAAGCAATGCGGTATCACGAAACCCATTTCGATGGCTGGACCAACGGTTAATGATTTGCAAAGGACTCTTGAGTTAGAAAAGTTTCTCGCTGTTTCGGGACTTTATGAGAACAAAGAGGAAGCTGCTAAGAGAGAAGAGGTTCTTCACCGACTTGAACAGATAGTAAAAAACTGGGTGAAGCAACTTACTCGCCTAAGGGGATACACTGATCAAATGGTGGAAGATGCAAATGCTATCATCTTGACTTTTGGTTCTTTTCGGCTTGGTGTTCATGGTCCCGGGGCTGACTTAGACACAATATGCATTGGACCTTCCTACGTGAATCGGGAGGAGGATTTTTTCTACACACTGCATGATATCCTTGCCAACATGGAGGAGGTCTCGGAATTGCAACCAATTCCGGATGCTCATGTCCCAGTCATGAAATTCAAGTTTGATGGAATATCAATTGACCTCCTTTATGCCAGTATTTCTCGCTTGATTGTACCTGAAGACTTGGTTATATCTGATGTCTCTCTTCTACACAATGTTGACGAGCCTACTGTGCGAAGTTTGAATGGCTGCAGAGTTGCAGATCAAATTCTAAAGCTTGTTCCTAATGTTGAGCACTTTCGAACAACACTTCGCTGCTTGAAATTTTGGGCCAAAAGGCGAGGCATTTATTCCAACGTGACGGGTTTTCTTGGTGGTGTTAACTTGGCACTTCTTGTAGCCCGAGTATGTCAGTTGTATCCAAATGCAGTTCCAAGTATGCTTGTTTCTCGATTCTTTAGGGTATATACACAGTGGCGGTGGCCAACTCCTGTCATGTTATGTCCAATAGAGGAGAATGAACTTGGTTTTTCTGTTTGGCATCCTCGTAAAAATCCTCGTGACCGATCCCATCTTATGCCAATTATTACTCCCGCCTATCCCTGTATGAATTCTAGTTATAATGTTTCCACAAGCACACTTCGTGTTATGATGGAGCAATTCCAATTTGGCAACAAGATATGTGGGGATGTAGAACTGAACAAAGGTTGTTGGAAGGATCTGTTTGAACCATACGGTTTTTTTGAAAGTTATACAAACTATTTGCAAGTTGATGTAGTTGCTGCTGATGTGGATGACTTGCGCAATTGGAAGGGTTGGGTGGGATCACGCCTTCGGCAGTTGACCTTGATGATTGAGCGTGACACTTTTGGGAAGTTGCAGTGCCATCCCTATCACCACGAGTATATGGATACCTCGAGGCAGAGTGCACATTGCGCTTTCTTTGTGGGTTTGCAGAGGAAGCAGGGAGAAGTAGTTCAAGAAGGCCAACAGTTTGATATACGAGGAACAATTGAAGAATTTTTGCATGCGGTTAATATGTACATGTTCTGGAAACCAGAGATGGAGATTTTTGTTTCTCATGTTCGTAGAAGGCAAATTCCATGCTATGTGTTTCCTGATGGTTATAAAAGATTGCGACCATCAAGGCCAACATCAAAAGAGAATCATAAATCATCTTGTAAAAATGAAGTTTCTGGGACTGAGATGCGTAAGAGGAAGAACAATGATGGGTTGGGTGTGAGGAGGGAGGATGCTACACTAAAAAAGCAATGTACTAGTCCTCCTGAAGGTAGATGGGCAAGTCGCAGTGGCCTTGGTACTGGTGCTGTGTCTGATAGTCAACAGTTGAGAAATGTGGAGTGCAATCATTTGTCAAACAGTGGGCAAGAGTTGGGTAGAACGGAGTCTCCTGAACCTGCCTCTAATTCTAGTGGGATTGCTTCGGTTACAAGTGATAGTGGTTCTTCTGAAGACACTGGAGCTGTATCTGTGGCAGGTTGTGTTGAAGATAGCACCGGGGGTGTTGATATGAACAACAATGGCAGGTTTGAGAGTAGTACATACGTGAACGGTTCTGTCCAACTGGTGAAAAACAGAGTGACAAGCGGTGACGAAGTATTTCAACACGAGCTAAAGGTGCAGTTGCAGCAAAATGCAATGCTAGGGAGGGTTCTTGATTCTACAGTAAAGGTTCATTCAGAGGCGGTGCAAGAGGCGGTGATAAGGCATGTTCATGAGACTGCGTGTGGCATCTGCAGTGTGAAGGATGTTGTGCAGTGGAGAAAAGAGGGGAGCCAGCAATTTGGGAGTAGGGAGAGCCAGGGAGAGGGTGGTGTGGTGGGTGGGTTGTCTAGTGTGTTCTAG 2211 0.4478 MGSSEGLGASSKQCGITKPISMAGPTVNDLQRTLELEKFLAVSGLYENKEEAAKREEVLHRLEQIVKNWVKQLTRLRGYTDQMVEDANAIILTFGSFRLGVHGPGADLDTICIGPSYVNREEDFFYTLHDILANMEEVSELQPIPDAHVPVMKFKFDGISIDLLYASISRLIVPEDLVISDVSLLHNVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGIYSNVTGFLGGVNLALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENELGFSVWHPRKNPRDRSHLMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICGDVELNKGCWKDLFEPYGFFESYTNYLQVDVVAADVDDLRNWKGWVGSRLRQLTLMIERDTFGKLQCHPYHHEYMDTSRQSAHCAFFVGLQRKQGEVVQEGQQFDIRGTIEEFLHAVNMYMFWKPEMEIFVSHVRRRQIPCYVFPDGYKRLRPSRPTSKENHKSSCKNEVSGTEMRKRKNNDGLGVRREDATLKKQCTSPPEGRWASRSGLGTGAVSDSQQLRNVECNHLSNSGQELGRTESPEPASNSSGIASVTSDSGSSEDTGAVSVAGCVEDSTGGVDMNNNGRFESSTYVNGSVQLVKNRVTSGDEVFQHELKVQLQQNAMLGRVLDSTVKVHSEAVQEAVIRHVHETACGICSVKDVVQWRKEGSQQFGSRESQGEGGVVGGLSSVF* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01917 736 CDD NT_PAP_TUTase 54 209 - -
Phac10g01917 736 MobiDBLite consensus disorder prediction 495 538 - -
Phac10g01917 736 MobiDBLite consensus disorder prediction 495 560 - -
Phac10g01917 736 FunFam Putative poly(A) polymerase gamma 190 357 - -
Phac10g01917 736 SUPERFAMILY Nucleotidyltransferase 15 208 IPR043519 -
Phac10g01917 736 Pfam Poly(A) polymerase predicted RNA binding domain 362 422 IPR007010 GO:0003723|GO:0043631
Phac10g01917 736 Gene3D - 15 357 - -
Phac10g01917 736 SUPERFAMILY PAP/OAS1 substrate-binding domain 210 359 - -
Phac10g01917 736 Gene3D Poly(A) polymerase predicted RNA binding domain 361 477 - -
Phac10g01917 736 FunFam Nuclear poly(A) polymerase 4 361 477 - -
Phac10g01917 736 MobiDBLite consensus disorder prediction 575 609 - -
Phac10g01917 736 Pfam Nucleotidyltransferase domain 88 162 IPR002934 GO:0016779
Phac10g01917 736 MobiDBLite consensus disorder prediction 715 736 - -
Phac10g01917 736 FunFam Poly(A) polymerase alpha, putative 47 203 - -
Phac10g01917 736 Pfam Poly(A) polymerase central domain 15 359 IPR007012 GO:0043631|GO:1990817
Phac10g01917 736 Gene3D Beta Polymerase, domain 2 47 203 IPR043519 -
Phac10g01917 736 PANTHER POLY A POLYMERASE 9 520 - -
Phac10g01917 736 MobiDBLite consensus disorder prediction 575 610 - -
Phac10g01917 736 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 361 488 IPR011068 GO:0003723|GO:0016779|GO:0031123
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01917 Phac-Chr10 41529675 41534144 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01917 K14376 - gmx:100783237 1143.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01917 10 41529675 41534144 Phac10g01917 10 41529675 41534144 ECH