Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01810 ATGGCATCTCAAGGTTTGTGTCCTTTGATAAAAAATATTCTTCTTTTGGACTCTGAAGGGAAGCGTGTGGCAGTCAAGTATTACTCGGATGACTGGCCGACAAACCATTCAAAGTTAGCTTTTGAGAAGTTTGTATTTAGTAAGACTTTTAAGACAAATGCTCGAACAGAAGCTGAGGTAACACTACTTGAGAACAATATCATTATTTACAAATTTGTACAAGACCTGCATTTCTTTGTTACTGGTGGTGATGATGAAAATGAGCTCATTTTAGCATCGGTACTTCAAGGTTTCTTTGATGCAGTCACCCTTCTATTGAGGAGCAATGTTGACAAAAGAGAGGCACTTGAGAACTTGGATCTCATTCTATTGTGTCTTGATGAGATTGTTGATGGAGGGATGATACTTGAAACAAATGGACCTCTTATTGCTGAAAAAGTGACCTCTCATAGCTTGGATGCTGATGCCCCCTTGTCAGAGCAGACACTAACTCAAGCTTGGGCTACTGCCAGAGAACATTTGACAAGAACCCTTTTAAAATGA 543 0.3941 MASQGLCPLIKNILLLDSEGKRVAVKYYSDDWPTNHSKLAFEKFVFSKTFKTNARTEAEVTLLENNIIIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKREALENLDLILLCLDEIVDGGMILETNGPLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01810 180 CDD Zeta-COP 11 146 - -
Phac10g01810 180 Pfam Clathrin adaptor complex small chain 10 149 IPR022775 -
Phac10g01810 180 SUPERFAMILY SNARE-like 10 151 IPR011012 -
Phac10g01810 180 PANTHER ZETA-COAT PROTEIN 6 179 IPR039652 GO:0006890|GO:0030126
Phac10g01810 180 FunFam Coatomer subunit zeta-2 4 150 - -
Phac10g01810 180 Gene3D - 5 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01810 Phac-Chr10 40780253 40783951 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01810 K20472 - gmx:547466 331.257