Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01786 ATGGCATCGCATTTACTCAATCACTCCGCCAAGGTGAGAAATGCTTCGAAGTTGCTGCACCACGAGCGCGCTCTCTTGGCTCGTTGGTTTTCCGGCGATGCTCAATCCTCTCTCAATAGGAACCGCGATGTGTGGAAAACTCAGCTCCCCGAGTCTTCAACAAGAAGCGGTGTCTTTGTACCAGCCTCCGGCTTTACTAAGAGAAACATCTCCATGGCTAGCATTAAAAGGGGATACATTATGGGGTCAGGGTTCAGTGGAGAGATTTCGCAAAGTTCACAGGTGTTGTCAAGAAGATGCTATGCGTCAGCCTCAGATCTACCCCCCCACCAGGAAATTGGAATGCCTTCTCTCTCACCTACAATGACAGAGGGTAACATTGCGAGATGGTTGAAGAAAGAAGGTGATAAAGTTTCTCCTGGTGAAGTGCTCTGTGAAGTTGAGACTGATAAAGCTACTGTTGAAATGGAAAGTATGGAAGAAGGTTATCTGGCCAAGATAGTCCGAGGAGATGGGGAAAAAGAAATTAAAGTTGGTGAGGTAATTGCCATAACTGTTGAAGATGAGGGGGATATTGCCAAGTTTAAAGATTACAAACCTTCAGCATCTGAACCAAGTGCACCTCCTGCCAAAGAAACATCTGCACCATCCCCACCAAAGAAGGAAGTGGCAGAGGAGCCTGCTCGAGAACCTGAACCAAAGGTTTCCAAACCTAGTGCGCCAACTTCATCTGGAGATCGCATATTTGCTAGCCCTCTTGCTAGAAAGTTGGCTGAAGAGAAAAACGTACCTCTCTCTAGCATTAAAGGAACAGGACATGAAGGACTCATTGTGAAGGCAGATATTGAAGACTTCTTGGCTTCTGGTCAAGTTTCTGCACCCTCAAAGGCCAAGGGCCCAACAGATGCAGCTTTGGATTATATCGACATTCCTGTCTCTCAGATACGGAAGGTCACAGCTTCACGGCTATTATTATCAAAGCAAACTATTCCTCATTACTATTTAACAGTGGATGCATGTGTTGATAAACTCATGAGTTTACGGAGCAAACTCAATTCATTGCAAGAAGCCTCTGGTGGCTCCCGCATATCAGTTAATGACCTTGTAATCAAGGCTGCTGCATTGGCTCTCCGCAAAGTTCCTCAATGTAACAGTTCATGGGCGAATGATTATATTCGACAGTATAATAATGTGAATATTAATGTAGCTGTGCAGACTGATAATGGTCTCTTTGTTCCAGTTATCAGGGATGCAGACAAAAAAGGTCTTTCTACAATAGGGGAGGAGGTCAAACAATTGGCAAAGAAAGCCAAGGAAAACAGCTTGAAACCCCAAGATTATGAGGGAGGTACATTTACAGTGTCTAACCTGGGAGGGCCATTTGGTGTCAAACAATTCTGTGCAATCATCAATCCTCCTCAGTCGGGCATTCTTGCAGTTGGATCTGCTGAGAGGAGGGTCATTCCGGGATCAGGTGCGGAAGAATTCAAATTTGGTTCTTTCATGTCTGTGACCCTCAGCTGTGATCATCGTGTTATAGATGGTGCAATTGGTGCCGAATGGTTAAAAGCATTCAAAGGCTATATTGAAAATCCAGAATCCATGTTGTTGTAA 1614 0.448 MASHLLNHSAKVRNASKLLHHERALLARWFSGDAQSSLNRNRDVWKTQLPESSTRSGVFVPASGFTKRNISMASIKRGYIMGSGFSGEISQSSQVLSRRCYASASDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMESMEEGYLAKIVRGDGEKEIKVGEVIAITVEDEGDIAKFKDYKPSASEPSAPPAKETSAPSPPKKEVAEEPAREPEPKVSKPSAPTSSGDRIFASPLARKLAEEKNVPLSSIKGTGHEGLIVKADIEDFLASGQVSAPSKAKGPTDAALDYIDIPVSQIRKVTASRLLLSKQTIPHYYLTVDACVDKLMSLRSKLNSLQEASGGSRISVNDLVIKAAALALRKVPQCNSSWANDYIRQYNNVNINVAVQTDNGLFVPVIRDADKKGLSTIGEEVKQLAKKAKENSLKPQDYEGGTFTVSNLGGPFGVKQFCAIINPPQSGILAVGSAERRVIPGSGAEEFKFGSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01786 537 ProSiteProfiles Biotinyl/lipoyl domain profile. 110 186 IPR000089 -
Phac10g01786 537 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 106 210 - -
Phac10g01786 537 MobiDBLite consensus disorder prediction 197 247 - -
Phac10g01786 537 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 241 287 IPR036625 GO:0016746
Phac10g01786 537 SUPERFAMILY Single hybrid motif 109 204 IPR011053 -
Phac10g01786 537 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 135 164 IPR003016 -
Phac10g01786 537 Gene3D - 105 211 - -
Phac10g01786 537 MobiDBLite consensus disorder prediction 218 233 - -
Phac10g01786 537 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 292 535 - -
Phac10g01786 537 CDD lipoyl_domain 111 184 - -
Phac10g01786 537 Pfam e3 binding domain 248 283 IPR004167 GO:0016746
Phac10g01786 537 SUPERFAMILY CoA-dependent acyltransferases 307 537 - -
Phac10g01786 537 Gene3D - 291 535 IPR023213 -
Phac10g01786 537 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 307 537 IPR001078 GO:0016746
Phac10g01786 537 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 89 537 IPR045257 GO:0006086|GO:0045254
Phac10g01786 537 Gene3D - 237 290 IPR036625 GO:0016746
Phac10g01786 537 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 249 286 IPR004167 GO:0016746
Phac10g01786 537 Coils Coil 337 357 - -
Phac10g01786 537 Pfam Biotin-requiring enzyme 112 184 IPR000089 -
Phac10g01786 537 NCBIfam pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 112 537 IPR006257 GO:0004742|GO:0006090|GO:0045254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01786 Phac-Chr10 40490774 40497923 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01786 2 537 Acyl Lipid Metabolism Gene Families AT1G54220 67.582 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01786 K00627 - gmx:100804938 904.434