Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01720 ATGGCGGAAAGCGCATCACCGTCGTCCAAACCCTCACCAATGGACCCTCAAAACCCCGCGCCATCTTCCAACCCTACAATCCCTTCCCCTTCCCACAACATGCCTTCACCCTCGCTCCCTCCGCTTCCCCAAGACCACCAACACCAACAGCAGCAGCAAAATATTCATCAACAATTGAGTCCCCCTCAACAACAACAGCCTCTCGTATCGTCGCAAGCCATGAACACCATCAACGGCATCAACCCTATCTCCAATTTCCAACTCCAGCAGACGCTTCAGCGATCGCCTTCCATGTCGCGCCTCAATCAAATCCAGCCTCAGCAGCAGTCGCAGCAGCAGCAGCAGTTCGGCGTCATGCGCCAGCAGGCCGGATTATACGGCGGACAGATGACCTTCGCTACCGCGGGCGGCGGAGCGGGCCAGCAGCAGCAGTTGGGCAGCTCCAATTTGTCGCGGTCCGCGTTGATAGGGCAGAGCGGGCACTTCCCCATGTTGTCCAGTGCTGCCACGCAGTTTAACTTGCTCTCCTCGCCAAGGCAAAAAGGTGGGCTAGTTCAGCAGTCTCAATTCTCAGGTAATTCTGCTGGACAATCACTGCAAGGAATGCAAGCAATGGGCATGATTGGATCACCAAATCTCACCTCACAACTGCGAGCTAATGGAGCTGTGGCTTATGCACAGCAGCTGCGAATGAGTCAGGGTCAAATCAGGCAGCAAATGTCACAGCAGAGTTCACTTAACACTGGACAGGTTCAAGGTTTACCAAGGTCATCATCCCTTGCTTTTATGAATTCTCAGTTGTCTGGATTGTCTCAGAATGGGCAGCCAGCGATGGTTCATAACTCCTTAACACAGCAACAGTGGCTTAAGCAAATGCCGGCAATGTCTAGCCCTGCCTCACCATTGCGTCTTCAACAGAGGCAGCAGCTGGCTTCTTCTACTCAATTGCAACAAAACTCTATAAGCCTGAACCAACAACAATTGTCCCAGCTGATTCAGCAACAGAAATCGATAGGGCAGCCTCAGCTGCATCAGCAGCAACAACAGCAGCAGCCTCAGCAGCTGCAACAGCAGCTCATACATCAGCAGCCACAACAGCAGTCTCAGCCACAGGCTTCTGTTCATCAACAGCAACAGTCTCCAAGGATGCCAGGACCTGCAGGCCAAAAGTCATTCAGTCTAACAGGATCACAGCCAGATGCTACTGCATCTGGTGCAACTACACCAGGTGGTAGTTCTAGCCAAGGAACTGAAGCAACAAACCAGGTTCTTGGGAAGAGAAAGATACAGGATTTAGTTGCACAGGTGGATCCACAAGGTACACTGGACCCCGAAGTTATAGATCTTCTTTTAGAGCTTGCTGATGACTTCATTGATTCTACAACTACACACGGTTGCATTTTGGCAAAACATAGAAAATCGCCAACTTTGGAGTCCAAGGATTTATTGCTACACCTAGAGAAAAATTGGGATTTAACAGTTCCGGGATATTCGAGTGAAGAGAAGAAGTATCAAAGCAAACCTCAATTAAATGACCTCCACAAGAGGCGCCTAGATATGATTCGCACATTGATGGAATCTTCGGCCTCTGAGTCAAATATTAACAGTTCTAAAGAGTTGAGTAGACAGGGCATTTCTAATCCTACCCCTGTGGGAGCTCACCATCTAGTAAGACCCTTGAGTTCAGAGCAGTTGGTTTCTCATGCAGCTGGTTCTCAAATGCTACAGCAGATGACAAGGTTTTAA 1746 0.4977 MAESASPSSKPSPMDPQNPAPSSNPTIPSPSHNMPSPSLPPLPQDHQHQQQQQNIHQQLSPPQQQQPLVSSQAMNTINGINPISNFQLQQTLQRSPSMSRLNQIQPQQQSQQQQQFGVMRQQAGLYGGQMTFATAGGGAGQQQQLGSSNLSRSALIGQSGHFPMLSSAATQFNLLSSPRQKGGLVQQSQFSGNSAGQSLQGMQAMGMIGSPNLTSQLRANGAVAYAQQLRMSQGQIRQQMSQQSSLNTGQVQGLPRSSSLAFMNSQLSGLSQNGQPAMVHNSLTQQQWLKQMPAMSSPASPLRLQQRQQLASSTQLQQNSISLNQQQLSQLIQQQKSIGQPQLHQQQQQQQPQQLQQQLIHQQPQQQSQPQASVHQQQQSPRMPGPAGQKSFSLTGSQPDATASGATTPGGSSSQGTEATNQVLGKRKIQDLVAQVDPQGTLDPEVIDLLLELADDFIDSTTTHGCILAKHRKSPTLESKDLLLHLEKNWDLTVPGYSSEEKKYQSKPQLNDLHKRRLDMIRTLMESSASESNINSSKELSRQGISNPTPVGAHHLVRPLSSEQLVSHAAGSQMLQQMTRF* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01720 581 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 11 539 IPR037794 GO:0000124|GO:0005669|GO:0046695
Phac10g01720 581 MobiDBLite consensus disorder prediction 343 423 - -
Phac10g01720 581 MobiDBLite consensus disorder prediction 12 42 - -
Phac10g01720 581 Gene3D Histone, subunit A 419 493 IPR009072 GO:0046982
Phac10g01720 581 MobiDBLite consensus disorder prediction 96 116 - -
Phac10g01720 581 MobiDBLite consensus disorder prediction 43 70 - -
Phac10g01720 581 MobiDBLite consensus disorder prediction 291 311 - -
Phac10g01720 581 MobiDBLite consensus disorder prediction 527 548 - -
Phac10g01720 581 FunFam Transcription initiation factor TFIID subunit 12 419 494 - -
Phac10g01720 581 CDD TAF12 424 492 IPR003228 GO:0005669|GO:0006352
Phac10g01720 581 MobiDBLite consensus disorder prediction 527 554 - -
Phac10g01720 581 MobiDBLite consensus disorder prediction 1 70 - -
Phac10g01720 581 Pfam Transcription initiation factor TFIID subunit A 425 492 IPR003228 GO:0005669|GO:0006352
Phac10g01720 581 SUPERFAMILY Histone-fold 422 493 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01720 Phac-Chr10 39996482 40005789 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01720 K03126 - gmx:100783017 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01720 10 39996482 40005789 Phac10g01720 10 39996482 40005789 ECH