Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01642 ATGGGGGTCTCCTTCAAGGTCTCCAAGACCGGCACTAGGTTTCGCCCCAAGTCAATTCCCCAACCGCACGAAGGCGCATCCGACAATTCCAAGTCCCAGAGTGGTCTTGTTGAGGCTGGTGAAAACATTGCTCAAATTCCCCAGTCATCTGCTTCATCTGAAACTCTTTCATTAGCAGAGAGGGAAGCTTCTTTCACATTGAACCTGTTTGCAGATGGTTATTCTATTGGAAAACCTTCAGAGAATGAGGCAGAAAATCATTCAAAATATCAAGATTTTCCAAAGTTGTTACACCCGTATGATAGGTCATCTGAAAGTCTTTTCCTGGCCATTGAGTCAGGTCACTTGCCTGGAGATATTCTTGATGATATACCTGCCAAATATGTCGATGGAGCACTAATATGTGAGGTGCATGATTATCGAAGATGCTCTTCTGAAAAAGGGAGTAGTGTGTCTGCAGAAAGTTCTCCTACTGTTAGCAAAGTATGCCTCAAGATGTCATTAGAAAATATTGTTAAGGACATTCCATCGATTACTGACAAGTCTTGGACATATGGTGATCTGATGGAAGTTGAATCAAAAATACTGAAATCATTACAACCAAAACTTCATCTAGACCCTACTCCAAAGTTAGATCGGCTGTGTGAAAGTTCACTTCCAACAAAGCTCAATTTGCCAAGAAAGCGATTAAGGAATATGCCAGAGTTTGCTGTTACTTCTACCAATAAAATTCATGGGAAGAAAGTATGCATAGATAGAGTGCAAGAAGGTTCAATTAGCAGGTTTGGTGATTCGGGAAACACTGTATCTAATGCTGTTACCCATGAAAATCAATCAGTGCAAAATCTTAGTCCGAATGTTGCCATGGCCTTGAGACCTAAGAATTTTATACCTGATTCTTCCATCCCTAACTTTTCAATGATGTCCCATCAACCAAGATATGCAATGGCAGTTGGAAGAAATTTGCAGGAGCAGGGACCAGTTCCTTCTATTAATTCATCAGGGGCTTCTCCTTCTGCACAAGATGTCATGATTTCATATGCTGATCATGCAAACTCAAGTACTTCTCTTCATGGAAAAAGGGATAATCAAGAAGGACAAGCATCGCCTTTAACCAATATTGCAAAAAGAATGAGGCCTACATCTGCTGTTGAACCAATGCAGCATCAGCAAATAGGTTCACATGTTGAATCTCTTCAAGGACCAGATATGAATTGGCAGAATACATTGCAACAACAAGCTTTGGCCAGAGGTATTCCATATGGAAGTAGTAGCATTCAGAAGTTTTCTCAGCAGGTTTTCGAAGGGGGGATGAATCAAGAGATGGGGGCAGTTTCCTTTACTTCTGGTCAGCAGGGCATGAGATTGGTTGCAAAGGAAGAACAGTTTGAAATGGAAAAAGTAGATGGTGCAAAGACAAACCGTAATAAGAGTGAAATGGAAATGGAAACAAACATATTAGATCCACAACAGTTGCGGCTTCAGCATCAGTTGTCACAGCATGCATTCATGAGACCTAATTTCCCTCAGGCAGCCTGGAACCTGGGTCAGCATATAGAGAAAGAAACAAAAAAAGACGACCAGCATCAGAAAAGGAAATCAGTTCAGAGCCCTCGGTTGTCGACTGGCACATTACCTCACTCCCCATTATCTTCAAAATCAGGTGAATTTTCCAATGGTGCAGTAGGACCAAGTTTTGGACCATCTTCAATGGCTGCTGTGCCCGGGACATCACAAAAAGACAAGACATCAATGGTCTCAGTTCCTGCCACTGTTGGAACTCCATCAAATGATTCTACACAAAGACAACAGCAGGCACAACTAGCTGCAAAACGGAGATCTAATTCCCTTCCTAAGACTCCGGCAATGAATGGAGTTGGCTCTCCTGTTAGTGTTGGCACAACCAGTGTCCCACTGAATGCAAATAGTCCCTCAGTTGTGACCTCAGGTTTGGTTGATCAAGGCCTTCAAAATATGCTTGAACGGTTCTCAAAAATTGAAATGGTGACAATGAGGCATCAACTTAACTTCAAGAAGAATAGGGTCGAGGATTTTCAAATGAAGAAGCAAAATGCATATGTAACACAACATATAGCACCACATCTTGCCAATTCAACTAGTAATGAGGGAGTGATAGACGATTCAATCTCTTTGTCAAAGTCACTTCTAGGTGGGAGTATGAATGCGTGTAAAATGAGAATCATAACATTTTGTGTGCCTGAGCGTGTAGTTCAAGGAAATCATGTTTCTGTAGTTCCAAGGATGCGAACTAGGATGATAATATTCGAGAAATCTGATGGTACTGTTGCTCTGTATTACGGGGATGCTGAAGAGGCTGATTACCTAGCTGCAGAGGATTATCTCCTCACATTACCCAATACTCATTCTGCGGATTTGCTTGCTCAACAGTTCTGTTCACAGATGATACACGAAGGATATGTGAAGGAAGATGACCGGATCCAACTTAAACCAAACCGTGTGAACCTTCCATTGGGCAATCAATCTACGCCTCCTAATAATTCTGTAGTTGAAATGCAACAATACGGAGAATCCGTTCCTGGCCAGTCATCTAATGAAGTTGCAAAACCAGCTTCTGGAAATAATGCATCTATAAACCTATCTCAGAATCTTGTAACAAACCCAAGGATGTTGCCACCTGGAAACCCCCAAGCCTTACAGATTTCTCAAGGACTTCTCTCTGGTGTTTCAATGTCTTCAAGACCACAGCAACTGGACTCTCAACAAACTGTACAGCAGCAGCAGCAGCTGCAACAAAATCAACACACACTCATTCAACAGCAGAATCCCCAGTTCCAGAGATCTCCTATGATGCTTGGGACAAATCAGCTTTCACACTTAAATCCAGTTGGACAGAACTCCAACATGCCGTTAGGTAATCACATGCTCAACAAATCTTCGGCTCTCCAGATTCAGATGTTCCAACAACATCAACAACAGCAGCAACAGCAGCAGCAGCCACAAATGCAAAGGAAAATGATGATGGGACTTGGACAAGCTATGGGAATGGGTAACTTGAGAAATAACCTAGTTGGGCTTGCACCCATGGGCAATCCTATGGGTATGGGAGGTGCAAGGGGAGGAATAGGAGGAAGTGGAATCTCAGCACCAATGACATCTATTTCTGGCATGGGAAATACGGGTCAGAATCCAATGAATCTTAGCCAGACTTCAAATATTACTAATTCCATAAGCCAACAATTCAGGTCCGGATCTCTAAATTCCACATCTGCTGAGATTTTATCAAGGCTTAGATTGGTACAGACTCGTGGAAGCATGTTAGGTTCCCCTCAGTCCAACATAGCTGGCATCTCTGGTGCCAGACAAATGCATCCTGGCACTGCTAGTCTTTCAATGTTGGGTAGGGCTAATACAATGCAGCGGCCAATTGGACCTATGGGTCCACCAAAGATGATGGCAGGGATGAATCTTTATATGAATCAGCAGCAGCAGCAACAACCCCAACAACAGCAGCAACACCAACAGCAGTTACAAATTCAACAACAGTTGCAGCAGCAGCAAGAAACAAGTTCACAATTGCAGGCAGTTGTTTCTCCCCCACAAGTGGGATCTCCATCAATGGGAGTTCCACCATTGAACCAACAAACACAGCAGCAAGCAAGCCCTCAGCAAATCAGTCAACGAACTCCGATGAGTCCCCAAATAAGCTCAGGTGCAATTCATGCCATAAGTGCCGGTAATCCTGAAGCTTGTCCAGCAAGTCCACAGTTGAGTTCTCAGACCCTTGGCTCTGTTAGTAGTATAACAAACTCCCCTATGGATATGCAAGGTGTTAACAAGAGCAACTCTGTCAGTAATGCACAATGA 3846 0.4308 MGVSFKVSKTGTRFRPKSIPQPHEGASDNSKSQSGLVEAGENIAQIPQSSASSETLSLAEREASFTLNLFADGYSIGKPSENEAENHSKYQDFPKLLHPYDRSSESLFLAIESGHLPGDILDDIPAKYVDGALICEVHDYRRCSSEKGSSVSAESSPTVSKVCLKMSLENIVKDIPSITDKSWTYGDLMEVESKILKSLQPKLHLDPTPKLDRLCESSLPTKLNLPRKRLRNMPEFAVTSTNKIHGKKVCIDRVQEGSISRFGDSGNTVSNAVTHENQSVQNLSPNVAMALRPKNFIPDSSIPNFSMMSHQPRYAMAVGRNLQEQGPVPSINSSGASPSAQDVMISYADHANSSTSLHGKRDNQEGQASPLTNIAKRMRPTSAVEPMQHQQIGSHVESLQGPDMNWQNTLQQQALARGIPYGSSSIQKFSQQVFEGGMNQEMGAVSFTSGQQGMRLVAKEEQFEMEKVDGAKTNRNKSEMEMETNILDPQQLRLQHQLSQHAFMRPNFPQAAWNLGQHIEKETKKDDQHQKRKSVQSPRLSTGTLPHSPLSSKSGEFSNGAVGPSFGPSSMAAVPGTSQKDKTSMVSVPATVGTPSNDSTQRQQQAQLAAKRRSNSLPKTPAMNGVGSPVSVGTTSVPLNANSPSVVTSGLVDQGLQNMLERFSKIEMVTMRHQLNFKKNRVEDFQMKKQNAYVTQHIAPHLANSTSNEGVIDDSISLSKSLLGGSMNACKMRIITFCVPERVVQGNHVSVVPRMRTRMIIFEKSDGTVALYYGDAEEADYLAAEDYLLTLPNTHSADLLAQQFCSQMIHEGYVKEDDRIQLKPNRVNLPLGNQSTPPNNSVVEMQQYGESVPGQSSNEVAKPASGNNASINLSQNLVTNPRMLPPGNPQALQISQGLLSGVSMSSRPQQLDSQQTVQQQQQLQQNQHTLIQQQNPQFQRSPMMLGTNQLSHLNPVGQNSNMPLGNHMLNKSSALQIQMFQQHQQQQQQQQQPQMQRKMMMGLGQAMGMGNLRNNLVGLAPMGNPMGMGGARGGIGGSGISAPMTSISGMGNTGQNPMNLSQTSNITNSISQQFRSGSLNSTSAEILSRLRLVQTRGSMLGSPQSNIAGISGARQMHPGTASLSMLGRANTMQRPIGPMGPPKMMAGMNLYMNQQQQQQPQQQQQHQQQLQIQQQLQQQQETSSQLQAVVSPPQVGSPSMGVPPLNQQTQQQASPQQISQRTPMSPQISSGAIHAISAGNPEACPASPQLSSQTLGSVSSITNSPMDMQGVNKSNSVSNAQ* 1282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01642 1281 MobiDBLite consensus disorder prediction 23 54 - -
Phac10g01642 1281 Pfam Spt20 family 61 213 IPR046468 -
Phac10g01642 1281 MobiDBLite consensus disorder prediction 1184 1234 - -
Phac10g01642 1281 MobiDBLite consensus disorder prediction 535 628 - -
Phac10g01642 1281 MobiDBLite consensus disorder prediction 1184 1281 - -
Phac10g01642 1281 MobiDBLite consensus disorder prediction 522 628 - -
Phac10g01642 1281 MobiDBLite consensus disorder prediction 1 54 - -
Phac10g01642 1281 MobiDBLite consensus disorder prediction 1244 1281 - -
Phac10g01642 1281 PANTHER TRANSCRIPTION FACTOR SPT20 HOMOLOG 1 1236 IPR021950 GO:0000124|GO:0003712
Phac10g01642 1281 Pfam PHL domain 672 824 IPR046467 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01642 - - var:108347422 2037.31