Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01547 ATGTCTTTCACTGCAACCAAGTTTGCTCCCTCTCCTCTCCCTCTCAATTCCACCACCCCCAGATCCAATGACAAGCCTCTCTCTTTCTCCTTTGATCACTCCAAAACCAACCCTTCTTCTTCCGCTTTTCTTGGATCCACTCGCAAGCTTCTTCGCTTCAGGGCTCCTGCCAAGCCTCGTTCTTCTTCCCCTGTTGCTGCTGTTCTTCTCCAACAAACTTCCAATCTGCTTATTACTAAAGAGGAAGGGTTGGAGCTCTATGAAGACATGATACTAGGGAGGTTCTTCGAGGACAAATGTGCTGAGATGTATTATAGGGGCAAAATGTTTGGTTTTGTTCACTTGTACAATGGCCAAGAGGCTGTGTCAACTGGATTCATCAAGCTTTTGAAGAAGGAGGATTATGTGGTGAGCACCTACAGAGATCATGTTCATGCATTGAGTAAGGGGGTCTCCGCTCGGGCTGTAATGAGTGAACTGTTTGGAAAGGCAACAGGATGCTGCCGTGGTCAGGGCGGTTCAATGCATATGTTCTCAAAAGAGCACAACATGCTTGGCGGTTTTGCATTCATTGGTGAAGGAATTCCAGTGGCCACTGGGGCTGCATTTTCGAGCAAGTACAGAAGGGAGGTGTTGAATCAGGCAGATGCTGATCAGGTGACATTGGCTTTTTTCGGAGATGGGACCTGTAACAATGGACAATTCTATGAATGCTTGAACATGGCAGCTCTATGGAAATTGCCAATTGTGTTTGTGGTGGAGAATAATTTGTGGGCTATTGGGATGTCACATCTCAGAGCAACTTCAGATCCTCAGATATGGAAGAAAGGGCCAGCTTTTGGAATGCCAGGGGTTCATGTTGATGGGATGGATGTTTTGAAGGTCAGAGAGGTGGCAAAGGAGGCAATTGGAAGGGCTAGAAGGGGAGAGGGACCAACTCTCGTGGAATGTGAGACCTATAGATTTAGAGGACATTCATTGGCTGACCCTGATGAGCTTCGCGACCCAGCTGAGAAGGAATACTATGCTGCTAGGGACCCCATCACTGCACTGAAACAATACCTTGCTGAAAACAATTTAGCCAGTGAGCAAGAACTGAAGGCCATAGAGAAGAAAATCGATGAGATTCTTGATGATGCAGTTGAGTTTGCAGACAATAGCCCTCTTCCACCCCGCAGTCAGCTTCTGGAGAATGTGTTTGCTGATCCAAAAGGCTTTGGAATTGGACCAGATGGAAAGTATAGATGTGAGGATCCAAAATTCACTGAAGGCACTGCTCAAGTCTAA 1287 0.467 MSFTATKFAPSPLPLNSTTPRSNDKPLSFSFDHSKTNPSSSAFLGSTRKLLRFRAPAKPRSSSPVAAVLLQQTSNLLITKEEGLELYEDMILGRFFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDYVVSTYRDHVHALSKGVSARAVMSELFGKATGCCRGQGGSMHMFSKEHNMLGGFAFIGEGIPVATGAAFSSKYRREVLNQADADQVTLAFFGDGTCNNGQFYECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEGPTLVECETYRFRGHSLADPDELRDPAEKEYYAARDPITALKQYLAENNLASEQELKAIEKKIDEILDDAVEFADNSPLPPRSQLLENVFADPKGFGIGPDGKYRCEDPKFTEGTAQV* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01547 428 NCBIfam pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 80 401 IPR017597 GO:0004739|GO:0006086|GO:0043231
Phac10g01547 428 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 71 411 - -
Phac10g01547 428 MobiDBLite consensus disorder prediction 1 38 - -
Phac10g01547 428 Gene3D - 54 410 - -
Phac10g01547 428 Coils Coil 359 386 - -
Phac10g01547 428 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 73 403 IPR029061 -
Phac10g01547 428 CDD TPP_E1_PDC_ADC_BCADC 86 384 - -
Phac10g01547 428 FunFam Pyruvate dehydrogenase E1 component subunit alpha 54 409 - -
Phac10g01547 428 Pfam Dehydrogenase E1 component 90 390 IPR001017 GO:0016624
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01547 Phac-Chr10 38671320 38674648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01547 5 428 Acyl Lipid Metabolism Gene Families AT1G01090 79.630 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01547 K00161 - gmx:100811207 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01547 10 38671320 38674648 Phac10g01547 10 38671320 38674648 ECH