Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01501 ATGAGTGTTTACAGCACCGTATTGCTCGTAATCCTCAGTTTGGTGGTAGCTTTCGTAATTCGGCGGTTGCTGTTCAAAACGGGATTGATACACAGCATAAGGAAACTCTTCAGAAGGGTTCAGGATTCGTTCCACGTCTACCAGTTCCTCAAAGTCCCTGAATTCAATGAAGCCATGCAGCGGAATCACCTTCACCGCAAAGTGTCTCTCTATTTGCATTCTCTTCCTTCAATAGAAGATGCTGACTTCACCAATCTCGTTTCAGGTTACGACCAAAACGACATCGTTTTGCGTCTCGACCCTAACCAAACCATCCAGGACCATTTCCTCGGGGCCACACTCTTCTGGTTCGAACAAAAAACTGAACCGGACCGGATTTCCTCCTTCGTTCTCAAAATCAGAAAAACAGATAAGCGCCGAATCCTACGCCAGTACCTCTGCCATATCAATACCGTTGCCGACGAGATGGAGAACCAAAGGAAGCGCCATTTGCGGTTGTTCATGAACGCCGCGGCAACCGAAGGCGGTACGGGAGAAACACGGTGGAGATCAGTTCCGTTCACTCATCCAGCGACTTTTGAAACGATAGTGATGGAAAAGGATCTTAAGAACAAAATCAAATCTGATATCGAATCGTTTCTCAAAGCGAAGCAATACTACCGTAAACTCGGCCGCGCGTGGAAGCGGAGCTTCCTATTGTACGGTGCCTCCGGCACCGGAAAGTCGAGCTTCGTCGCTGCGATGGCGAACTTCCTCCGCTACGACGTGTACGACGTGGACCTCTCGAAGATTCGCGGCGATTCGGATCTTAAGTTCCTCCTAATGGAAACGACGGCGAAGTCGATCGTCGTAATAGAGGATCTCGACAGATTTCTCGTACCGGAAAAGGAATCTGCAGTTACGGAGAGGGGGATCCAGAGCTTCATGGACGGGATTCTGAGCGCGTGTTGTGGTGAGGAGAGGGTAATGGTGTTCACGATGAACAGCAAGGAGTTCGTGAACCCGAACTTGATGCGGCCGGGTCGGGTCGACGTGCACATCCACTTTCCGGTTTGCGATTTCTCGGCATTCAAGACGCTTGCAAGCAGTTACCTTGGCGTTAGGGAGCACAAGCTGTTCGCGCAGGTGGAGAATATTTTCCGGCACGGTGGGAGTCTCAGCCCCGCCGAGATCAGCGAGTTGATGATCGCGAACCGGAACTCGCCGAGTCGGGCCATAAAGTCGGTAATCGGAGCGCTCCAATCGGACGGTGATGGGAGAAAGTACGCGGAGAAGATCGAACGGCAGATAGGGGTTGATGACATGGACGAACCGTCCTTTGGTGGGGACGAGTTATCTACGGTTAAGGATTTGCGGAAGTTTTACAGTTTCTTCAAAAAACGGAACGCCAGAAGAGTCAGCTACCCCAAAGTCCAACACCTTGGCCCATGA 1431 0.5115 MSVYSTVLLVILSLVVAFVIRRLLFKTGLIHSIRKLFRRVQDSFHVYQFLKVPEFNEAMQRNHLHRKVSLYLHSLPSIEDADFTNLVSGYDQNDIVLRLDPNQTIQDHFLGATLFWFEQKTEPDRISSFVLKIRKTDKRRILRQYLCHINTVADEMENQRKRHLRLFMNAAATEGGTGETRWRSVPFTHPATFETIVMEKDLKNKIKSDIESFLKAKQYYRKLGRAWKRSFLLYGASGTGKSSFVAAMANFLRYDVYDVDLSKIRGDSDLKFLLMETTAKSIVVIEDLDRFLVPEKESAVTERGIQSFMDGILSACCGEERVMVFTMNSKEFVNPNLMRPGRVDVHIHFPVCDFSAFKTLASSYLGVREHKLFAQVENIFRHGGSLSPAEISELMIANRNSPSRAIKSVIGALQSDGDGRKYAEKIERQIGVDDMDEPSFGGDELSTVKDLRKFYSFFKKRNARRVSYPKVQHLGP* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01501 476 Pfam ATPase family associated with various cellular activities (AAA) 232 350 IPR003959 GO:0005524|GO:0016887
Phac10g01501 476 Pfam Domain associated at C-terminal with AAA 29 116 IPR025753 -
Phac10g01501 476 SMART AAA_5 227 353 IPR003593 GO:0016887
Phac10g01501 476 Gene3D - 183 351 IPR027417 -
Phac10g01501 476 PANTHER BCS1 AAA-TYPE ATPASE 13 419 - -
Phac10g01501 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 409 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01501 Phac-Chr10 38129598 38131690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01501 185 395 Miscellaneous Gene Families AT5G53170 23.789 5.23e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01501 - K08900 gmx:100787809 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01501 10 38129598 38131690 Phac10g01501 10 38129598 38131690 ECH