Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01490 ATGGAAAGCAAGCAGCACAGCATGAAGCAAAGCAGCATGGAGACAGAGTTTGAGGACTTGCTGCCAGTGATGGCAGAGAAGCTTGATGTGGAGTCCTTTGTGTCAGAACTGTGTGGTGGTTTCAAGCTTCTATCAGACCCAGAAACAGGTTTGATAACAAGTGAGAGTCTGAGGAGAAACTCAGCTCTTCTTGGTATAGAGGGCATGAGTATGGAGGATGCAGATGCTATGGTTAGACAAGGTGATCTTGATGGTGATGGAAAGCTTAATGAAACTGAATTTTGCATTCTCATGGTCAGGCTTAGCCCTGGAATGATGGAAGATGCTGAGTCATGGCTGGAAAAGGCAATTCATGAAGAACTTAGGAACTCCCCAACTTAG 381 0.4541 MESKQHSMKQSSMETEFEDLLPVMAEKLDVESFVSELCGGFKLLSDPETGLITSESLRRNSALLGIEGMSMEDADAMVRQGDLDGDGKLNETEFCILMVRLSPGMMEDAESWLEKAIHEELRNSPT* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01490 126 SUPERFAMILY EF-hand 31 111 IPR011992 -
Phac10g01490 126 PANTHER CALCIUM-BINDING PROTEIN KIC 14 123 IPR044205 GO:0005509
Phac10g01490 126 Pfam EF-hand domain pair 48 100 IPR002048 GO:0005509
Phac10g01490 126 ProSiteProfiles EF-hand calcium-binding domain profile. 69 104 IPR002048 GO:0005509
Phac10g01490 126 ProSitePatterns EF-hand calcium-binding domain. 82 94 IPR018247 -
Phac10g01490 126 Gene3D - 14 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01490 Phac-Chr10 38077791 38078579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01490 11 123 EF-hand Containing Proteins AT2G46600 75.221 6.28e-60 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01490 K24345 - gmx:100802677 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01490 10 38077791 38078579 Phac10g01490 10 38077791 38078579 ECH