Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01475 ATGGCGGAATCAGATACGTCAATCCGAAACACGAAGATGAACCCCATCGATCACCTTCCCCTCTGTCTCCTCAGATCCGACACGGTCCCACCCGCCCCTACCTTCTCCGAATCCACCGTTGATTTCCTCCCTCACTTCTCCGGCTACTCTTGGATCGCCTACGCCGCTTCTTCTCTCCTCGTTATCTCCCACTTCCCTTCTCCTCTTTCCCCTCATCAATCCCGCATCGGCCCCATTTTCCGCCAATCCTTTCAGCTCTCACCCGATCCCCTCGCCGCCGTCGCCTGGTCCCCTCTCTCACCCTCCTCCGGTGACCTTGCCGCCGCTGCCGATAACTGCATCTGCCTTTTCCACCACGACTCCACCACCGTAAAAGGTTCTTTTTGTTGGAGCCAGAATGCAGTGCTTGTACAACATACGAAAGTTGCAAACATCAAATGGACTGGATCAGGAGATGGAATAATTTCTGTTGGAATGGAGGTGGTTTTCTGGAAAAAGAGCAACAAATGTTGGGAAGTTGCTTGGAAGTTTAAAGCAGATCAACCCCAAACTCTTGTTTCTGCAACGTGGTCTATTGAGGGCCCTTCAGCAACTGCAGCACATCCTAGTAAAGAACAGATTGAAGGGGCCTTGACCAATGACGAAAGAAAATGTGTAGTTGTATGTCAAAGCAATGGACTTTCTGAATATTCAAAAGTCGAACTACATCATCCCCTACCTGTTGTAATGATTCAATGGAGACCACCAAGAGGGAAGTTATCAAACAGATACGGTAAGTGTTCAGTAAGGCATGTTTTGTTGACATGCAGCATAGATGGGACTGCAAGGTTATGGAGTGAAACTAATAATGGAAAGGCCAGGAGAGTTGGGAAGGACATCAATGATCAGAAAAATGCGGGATGCTCCTTTTCTGTTGTTGCTGTTATTGAGATTAATCAGACCTTAAATGGAACTCTTGGTTCAGATATATTTGTGAGATGGGGGACAGAATTTGAGGGAATATTTAGAATTGGTGAAGAGTCCAAACAAGTTTTTTCCAAAGATGGATTTGAGCATGATGTCAGAAATTGCGATTGGATAGTTGGGTTTGGTCCTGGAATGTTGCTCAGCTTTTGGGCTGTCCACTGTCTTGACGATGTTTCACCACTGAGATTCCCTCGAGTTACATTATGGAAGAGACATGAACTCCAGAACCATGACATAGCAAATGTATACAAGTTTAACTCATCTGATTTTAAAAATGCATTATTTCTTCAAAAGGTTATTTTAATGAGAAATTGCCTTTCTGGTCCACCTATTATATGCTCTCCACTTCAGCTATTGTCTTGTAATTCCTTAGTTTGGTCAAATTTCCGTATTCTAACAATACATGATGCTGTGGAGAACTCCATTGATAGCACAGATAGCATGTCCCCCTATTTGACTGGTGGGGTTTTGAACTTAGATGGTCATAGTGGGAAAATCTTAAAGGTTTCAATTCATCCTTATTCATGCAAAGTTCAATTTGCTGCTTCTCTGGATTCTAATGGACTGCTTCTTTTCTGGTCACTTTCTAATATTTCAAACTGCATTTTGGGATGTCCAACTTTGGTTCCTACTATGGAACTCTGTGGAAAGCTTGCCACTCAAGACTCATGCTCATTGTACACAAGCTTGACATGGGCACCTTCAATAGTTGGTGACAAACTGTTTTTTTTCATGGGACATACCCGGGGGATTGATTGCTTCATTGTCAATATTTGTCGAACTGAAGAGGAAAACATAGAATGTCACTACTTATGCACTATTCCTTTCAATGGTCATGGTCCTTATGAAGATGCCCCTATTGATATCTTCACCATTCCTCTGAACTCTGCCTGTGACAAAACTTTTTGTAAGAGTAAACTTATGCTGTTGGCAGTATGGATGGGGAGATTTCAGGCCCTATCGTGGGAAGTTAACTTGCATTCATTTGACATGTCAACAAACTGTTGTGAATGCAATTTTGATGCTAAAAGCATTGATGACTGTAGTGTTTGGGCATTTGAAAGTACATTTGCTGATAAAAAATATTGCATTACTGTAAATCCATGTTCATGTGAGTTTCCAAGTTCCAATGATCTGGTTACTAGTTTCGCTGTGGCTAATCCAGGCACTGTAAGCCATATACGACAAGAGTTTGGCTTTGCAAATGATCTTTGTAGCAGTTATCCTACATACATCATGGTCACAGGCTCCTCTAATGGCATCTTGAAACTCTGGAAAAGTAAACCTGGGAACTCATTGACCCAACACTTGCCATGGGAGCCTGTGGGTGTTTTTGTTGCACATGATGGTCCCATCAAGGGTATATGTTTCTCTGATTGTGGTGAGAAGATTGCTACGATCGGCCACGAAAGCAATTCCAATGCTATCAATACCATACATATATGGGATGCTGTACCATTAATCAATGCAGGGACTTTTATTTTGGAGGATAAAATAAAGACCAATAGTGATGTTATTGCTCTAAAGTGGTTAACTTTAGGAACAGGGGAGTTATTGCTTGGAGTTTGTTTGCAAAATGAATTACAAATATATGCTCCCAAGCGTTGTATTGGTACAACTTTGTCAAACTCTGAACATTTTCCAAAAATGAATATATGGGTTCGCATTGCATATGCTCACACTTCCATTCCAATTTATGATTTCTTATGGGGACCTAGAGCTGCAGCAGTGGTGATTCATAGAAATTACTTTAGTATATTTAGTCATTGGTTGTTCCACATGGATAAAAAGCAAGGGAGTAATTGTCATCCTTGTGATTCAAAGCCTAATGCTTATAATTGTGAGGATGAAATATATGAAGACATACTTTCTGCAGTTTTTACTGAATATGACATTGGTGCTCTCAGAGAACAGACAGATGGAGACAGTCAAGTAGATTTTAATTATGTGCAGTCCATAAAAAAAAACAATATAAATGACAATTCCAGTAGCTTGTTTCTGGCCAAGGAACAATTAAAATTTGAACTTCTAACCAAGGTTGGTTTATGGAGCATCTTAGAAGTATCTGAGATAATCAGTGGATCGTTGCCTACTTATCACCCTGATGTACTACTTACTAATATCAGTTCAGGAAACTGGAAACGTGCTTATGTAGCTGTGAGGCATCTTGTTGAATGCCTGACTTCTACTTATGATCCTAAAAAGAGACACATCTCCAAAAGAATTGGTCTTCCTAATATTGTATTGTCAAATTATCTAGAAGGCTGTATATCAAAAGTTTCCCAGGGTAAGGGGTTTCAGTGGGGTGGGGATTCAGCATCAATTTCACAGGCTCAGAGTAGCTTGTTCCAGTTTCCATATCATTCAGGTTCCAATGCTGAAAATGAAAGCATTTTCTCAACAAAATCTGAGCTTAATGGCTTTATTGAATCACTTGAGAAATTTCCTGATTTACCACTGTTGATTGACATAGAGAAGACACAGATTCTTGCAATTATTGATCTGCTTAGTGAAGTTAGTAGTGCAGACTCATCTTCTGCGTATCAGAGTCTTGATGAACCTGGGCGAAGGTTTTGGGTTGCACTACGGTTTCGGCAACTGCTTTTTCTCCGTAAGTTTGGTAGAGCTGCGTCTTTTGAAGAGTTGCCTGTTAACTCAAGATTGTTTGTATGGGCTTATCACTCTGACAGCCTAGATAATTTATTTGGTTCTGTCATACCCAATGAACCATCTTGGCAAGAAATGCGTGCTTTGGGTTTGGGCTTTTGGTATGCTAATATACCTCAATTACGTGCAAGGATGGAGAAATTGGCAAGAGCTCAGTATTTGAAGAACAAAAATCCAAAGGATTGTGCTTTGCTTTATATTGCATTGAATAGAATTCAAGTTTTGGCTGGCCTTTTCAAAATCAGTAAGGATGAGAAGGATAAGCCTCTGGTGGGCTTTCTTTCTCGCAATTTTCAGGACGAAAAAAATAAAGCTGCTGCTTTAAAAAATGCTTATGTATTACTGGGAAGGCATCAGATGGAATTAGCAGTTGCTTTCTTTTTGCTTGGAGGTGATCATTCTTCTGCTATAAACGTTTGTGCTAAGAATCTTGGAGATGAACAGCTTGCCTTAGTCATTTGTCGTCTTGTTGATGGCCACGGGGGACCTTTGGAGCATCACCTAATTACAAAGTACATACTTCCATCTGCAATTGATAAAGGAGACTACTGGCTTGCAAGCCTTCTGGAGTGGGAAATGGGTAATTACTACAGATCTTTTTATAGAATGCTAGAGTATTCAGTAAACCCTGGGCCTCCGGAGTCCACTGTCATGTCCAATTGTGGTTCTTTTCTGGACCCTACAGTTGGTTTTTATTGCCAAATGCTAGCAACTAAGAATAGCATGCGGAACGCCGTGGGGGAGCACAATTCTGCAATTCTTTTAAGATGGGCAACTTTGATGACAGTTGCTTCCTTAAAAAGATGTGGTAATCCTCTTGAAGCATTGGAGTATTTCTCATCTTCACTGAGCATGCCTGGGAATGCAGATCAAGACAGTGAATTAGGTGACAATCATGATGTGCTGTCCAATACTCTTAAGCCTTTGCCTAGAGAAGGCTCTAATTGGTTGTCTGCTAATGTTTCCATGCATCTAGAATTCCATATTAAATTGAATTTGGCACTTTGCTACTTATCAAAATTGATAAGAGAGCATCCAAGCTGGCTTGACACTTTTTCAGAACACAATGAAGAAGCTTGTGATTCTGACGAGTACATGATGTACTATGAGAAATCAGTTGAAAGTTTTAAACAAAAGTTATACAGTGGGCTTGCTCTATTTGAACAGAGGTTTTTATTGGCTCCCCACTGTCTAATCGGCATGATTTTACTCTTACTTTGCCATCATGGATCATTGTACATTGGATATGATATGACAGATGGATCTACCCAAGGAGAACTGTCTCAAAAGAAGAGCGATATGTTTGATGATTTCAATTTATGTTACTCTAGGATTACACCCCTCTTTAAGACTGCAGAAGAAGTCTCCTTTCTCTATTCAAGATTATTTTGTGCCTGCAGTATGGAAAATTCTCAACGAGATTCATTTATTGATAGCAAACCTAAGTTTTTTTATGCTTCAGAGTGCCGCATTGAAGGTGTTTTTATTTCATTGTGGTTTTTAAGAGCAACTTTGAGGATCCAATTGAGTTCTATTAGCAAGGATCTTATTAAAACACTTCTTGATATCCTAGATTTTTATGAGTACTATTTACATTTTTCATTAGCTTGGCTTCAGAAAAACTCTGAAGTGCTTTTGTATATGGTGGAACCATTCTTTGTTGCACTATCTAATGGTCATAATCCTTATGACATTGATATGGTAAATCTAAAGAAGCTTATCCCAAAAGTTGGACAGTTGTTGTCTCAAACTTCTTCCATACCTAGTGTGCAAAACCTTCAACTGTCTGAACGTGATATGAAGCATTCAATTCCTGATGATGAAAGATGGAAGATTTTAGGGACCTGCTTGTGGCAGCATATGTCTAGATTCATGATATCAAATTTGAATTCGGTACTTGCCAAACTTGAAGATGGTAATTTGTCTGGTCCTTTCCATAGAAAGTATGCTTATGGCGAGTCTTGTATCGTAAGTATGGATTCTGAAAGCATTAGCTTGCCAGAGAAGATTCGGATAGTCTCATATAGCCTATGTGATCTACTGATGACAACAGTTACTCACATCTCTTCTTATCAAGTTAAACAACATGCAGAATTTCTGTGGCAGAAAGTAAAGAATGATTTGAATGTACAGACTCTTGAATGGTTAAAACATAAATCTGAATTCAGTCAGAACCAAAACCTGGACGTTTTGGAACCGGGGAACAGGAAAGATTATTCAGTTCATCAGTTATTATGGGATCACAGTGCAGATCCCAAATTGATATTGGATTGCTTTGCACAGGAAAAAATCAATTGGCCAAATGATTTGGATCATATGCACACTAAGGGGTGGAATGACTTGTCAATGATTATGACAGGGCTGCATAAAAGTGATGATACATGTGGTGACGACTTCAATCTTAGCACTAGATCTTCTAATCATGAAGTTGGAACTCCTGTTAAAGAAACATCTCTAAATGGCCATCATTCTGCAAGATCAAACCAGAAAGATATAACTTCTACAAATTTTGCAGTTTTCCAGAGTCCAAGAGAAATGTACAAGAGAAATGGGGAACTTTTGGAGGCATTGTGTATAAACTCTACTTGTCAACAGGAAGCTGCGGTTGCTAGCAACAGGAAGGGTATAATGTTCTTTCATCTGGAAGATGAGATTCCACACAGTGGTAAATCAAATGGTCTTTTGTGGGCCACAGCTGACTGGCCTCAGAATGGATGGGCAGGTTCAGAATCCACCCCTACTCCAACATGTGTCTCTCCTGGTGTTGGGCTTGGGAACAGGAAAGGGGCACACCTTGGGCTGGGTGGAGCAACTGTCGGTGTGGACTCTTCAACTTGGCCTAGCAATGACTTGACAGGTGGCGGAGTATTAGGAATGCTAGGTTATGCTGATATTGGTGCCTCTAGATTAGGTTGGGAAATTCAACAAGATTTTGAAGATTTTGTTGATCCACCTGCCACTTTGGATAACATAAGTACCAGGGCTTTGTCTAGTCATCCAATGAGGCCTTTCTTCTTGGTTGGTTCTAGCAATACACACATTTACTTGTGGGAGTTCAACAAAGACAAAGCTACTGCTACATATGGAGTGCTGCCTGCTGCGAATGTCCCTCCACCTTATGCCCTTGCATCAATTTCATCCTTACAGTTTGACCATTTTGGACACCGGTTTGCCAGTGCTGCATTAGATGGAACTGTCTGCACATGGCAGCTGGAGGTTGGAGGAAGGAGCAATGTCCGTCCAATAGAATCATCTCTTTGCTTTAATGGTCATGCTTCGGATGTCACATATTTTTCCTCAAGTGGATCAATAATAGCTGTGGCTGGATATAGCTCTAATGGTGTTAATGTGGTCATATGGGATACTTTAGCTCCACCCACAACTTCTCGCGCTTCCATTTTATGTCATGAAGGTGGTGCACAAACCGTGTCTGTCTCGGATAATCATGTGGGAAGTGGTTCTGTATCCCCCCTTATTGTGACCGGTGGTAAAGGTGGTGATGTTGGACTTCATGACTTCCGCTATATAGCTACTGGAAAGGCTAAAAGGCATAGGCATGCTGATAACATTGGACAAAGCTCTGCCAAATCTTTGGCTCGTGACAAGGACCAGAATGTAGATGGGATGCTTTGGTACATTCCAAAGGCTCACTCAGGGAGTGTCACAAAAGTAGTTACCATCCCCAATACCAGCTTGTTTTTAACTGGAAGCACAGATGGAGATGTCAAACTCTGGGATGCCCAGAGCACAAAGTTAGTACATCACTGGTCAAAGATACATGAAAAACACACTTTTCTACAGCCAAGTTCTCGTGGATTTGGTGGTGTAGTGCGGGCTGCTGTAACAGATATAAAAGTCATTTCCAATGGTTTTCTTACATGCGGTGGGGATGGAACTGTAAAGCTGGTACGGCTTGACAATCACCTGCGTGGCCATTGA 7572 0.4085 MAESDTSIRNTKMNPIDHLPLCLLRSDTVPPAPTFSESTVDFLPHFSGYSWIAYAASSLLVISHFPSPLSPHQSRIGPIFRQSFQLSPDPLAAVAWSPLSPSSGDLAAAADNCICLFHHDSTTVKGSFCWSQNAVLVQHTKVANIKWTGSGDGIISVGMEVVFWKKSNKCWEVAWKFKADQPQTLVSATWSIEGPSATAAHPSKEQIEGALTNDERKCVVVCQSNGLSEYSKVELHHPLPVVMIQWRPPRGKLSNRYGKCSVRHVLLTCSIDGTARLWSETNNGKARRVGKDINDQKNAGCSFSVVAVIEINQTLNGTLGSDIFVRWGTEFEGIFRIGEESKQVFSKDGFEHDVRNCDWIVGFGPGMLLSFWAVHCLDDVSPLRFPRVTLWKRHELQNHDIANVYKFNSSDFKNALFLQKVILMRNCLSGPPIICSPLQLLSCNSLVWSNFRILTIHDAVENSIDSTDSMSPYLTGGVLNLDGHSGKILKVSIHPYSCKVQFAASLDSNGLLLFWSLSNISNCILGCPTLVPTMELCGKLATQDSCSLYTSLTWAPSIVGDKLFFFMGHTRGIDCFIVNICRTEEENIECHYLCTIPFNGHGPYEDAPIDIFTIPLNSACDKTFCKSKLMLLAVWMGRFQALSWEVNLHSFDMSTNCCECNFDAKSIDDCSVWAFESTFADKKYCITVNPCSCEFPSSNDLVTSFAVANPGTVSHIRQEFGFANDLCSSYPTYIMVTGSSNGILKLWKSKPGNSLTQHLPWEPVGVFVAHDGPIKGICFSDCGEKIATIGHESNSNAINTIHIWDAVPLINAGTFILEDKIKTNSDVIALKWLTLGTGELLLGVCLQNELQIYAPKRCIGTTLSNSEHFPKMNIWVRIAYAHTSIPIYDFLWGPRAAAVVIHRNYFSIFSHWLFHMDKKQGSNCHPCDSKPNAYNCEDEIYEDILSAVFTEYDIGALREQTDGDSQVDFNYVQSIKKNNINDNSSSLFLAKEQLKFELLTKVGLWSILEVSEIISGSLPTYHPDVLLTNISSGNWKRAYVAVRHLVECLTSTYDPKKRHISKRIGLPNIVLSNYLEGCISKVSQGKGFQWGGDSASISQAQSSLFQFPYHSGSNAENESIFSTKSELNGFIESLEKFPDLPLLIDIEKTQILAIIDLLSEVSSADSSSAYQSLDEPGRRFWVALRFRQLLFLRKFGRAASFEELPVNSRLFVWAYHSDSLDNLFGSVIPNEPSWQEMRALGLGFWYANIPQLRARMEKLARAQYLKNKNPKDCALLYIALNRIQVLAGLFKISKDEKDKPLVGFLSRNFQDEKNKAAALKNAYVLLGRHQMELAVAFFLLGGDHSSAINVCAKNLGDEQLALVICRLVDGHGGPLEHHLITKYILPSAIDKGDYWLASLLEWEMGNYYRSFYRMLEYSVNPGPPESTVMSNCGSFLDPTVGFYCQMLATKNSMRNAVGEHNSAILLRWATLMTVASLKRCGNPLEALEYFSSSLSMPGNADQDSELGDNHDVLSNTLKPLPREGSNWLSANVSMHLEFHIKLNLALCYLSKLIREHPSWLDTFSEHNEEACDSDEYMMYYEKSVESFKQKLYSGLALFEQRFLLAPHCLIGMILLLLCHHGSLYIGYDMTDGSTQGELSQKKSDMFDDFNLCYSRITPLFKTAEEVSFLYSRLFCACSMENSQRDSFIDSKPKFFYASECRIEGVFISLWFLRATLRIQLSSISKDLIKTLLDILDFYEYYLHFSLAWLQKNSEVLLYMVEPFFVALSNGHNPYDIDMVNLKKLIPKVGQLLSQTSSIPSVQNLQLSERDMKHSIPDDERWKILGTCLWQHMSRFMISNLNSVLAKLEDGNLSGPFHRKYAYGESCIVSMDSESISLPEKIRIVSYSLCDLLMTTVTHISSYQVKQHAEFLWQKVKNDLNVQTLEWLKHKSEFSQNQNLDVLEPGNRKDYSVHQLLWDHSADPKLILDCFAQEKINWPNDLDHMHTKGWNDLSMIMTGLHKSDDTCGDDFNLSTRSSNHEVGTPVKETSLNGHHSARSNQKDITSTNFAVFQSPREMYKRNGELLEALCINSTCQQEAAVASNRKGIMFFHLEDEIPHSGKSNGLLWATADWPQNGWAGSESTPTPTCVSPGVGLGNRKGAHLGLGGATVGVDSSTWPSNDLTGGGVLGMLGYADIGASRLGWEIQQDFEDFVDPPATLDNISTRALSSHPMRPFFLVGSSNTHIYLWEFNKDKATATYGVLPAANVPPPYALASISSLQFDHFGHRFASAALDGTVCTWQLEVGGRSNVRPIESSLCFNGHASDVTYFSSSGSIIAVAGYSSNGVNVVIWDTLAPPTTSRASILCHEGGAQTVSVSDNHVGSGSVSPLIVTGGKGGDVGLHDFRYIATGKAKRHRHADNIGQSSAKSLARDKDQNVDGMLWYIPKAHSGSVTKVVTIPNTSLFLTGSTDGDVKLWDAQSTKLVHHWSKIHEKHTFLQPSSRGFGGVVRAAVTDIKVISNGFLTCGGDGTVKLVRLDNHLRGH* 2524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01475 2523 FunFam Transducin family protein / WD-40 repeat family protein 2198 2475 - -
Phac10g01475 2523 PANTHER RABCONNECTIN-RELATED 25 2514 - -
Phac10g01475 2523 Pfam WD domain, G-beta repeat 2425 2457 IPR001680 GO:0005515
Phac10g01475 2523 Gene3D - 443 856 IPR015943 GO:0005515
Phac10g01475 2523 ProSiteProfiles Trp-Asp (WD) repeats profile. 2425 2466 IPR001680 GO:0005515
Phac10g01475 2523 MobiDBLite consensus disorder prediction 2015 2039 - -
Phac10g01475 2523 SMART WD40_4 2469 2515 IPR001680 GO:0005515
Phac10g01475 2523 SMART WD40_4 2418 2457 IPR001680 GO:0005515
Phac10g01475 2523 SMART WD40_4 2337 2383 IPR001680 GO:0005515
Phac10g01475 2523 SMART WD40_4 760 805 IPR001680 GO:0005515
Phac10g01475 2523 SMART WD40_4 77 118 IPR001680 GO:0005515
Phac10g01475 2523 SMART WD40_4 2292 2332 IPR001680 GO:0005515
Phac10g01475 2523 SMART WD40_4 688 748 IPR001680 GO:0005515
Phac10g01475 2523 SMART WD40_4 2192 2229 IPR001680 GO:0005515
Phac10g01475 2523 SMART WD40_4 228 279 IPR001680 GO:0005515
Phac10g01475 2523 SMART WD40_4 474 516 IPR001680 GO:0005515
Phac10g01475 2523 SMART WD40_4 2246 2281 IPR001680 GO:0005515
Phac10g01475 2523 Gene3D - 68 315 IPR015943 GO:0005515
Phac10g01475 2523 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 2425 2460 - -
Phac10g01475 2523 Pfam RAVE protein 1 C terminal 798 1406 IPR022033 -
Phac10g01475 2523 SUPERFAMILY WD40 repeat-like 2205 2517 IPR036322 GO:0005515
Phac10g01475 2523 Gene3D - 2197 2522 IPR015943 GO:0005515
Phac10g01475 2523 SUPERFAMILY WD40 repeat-like 82 809 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01475 Phac-Chr10 37916932 37934817 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01475 K24155 - gmx:100789935 4474.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01475 10 37916932 37934817 Phac10g01475 10 37916932 37934817 ECH