Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01407 ATGACTACTGCAAATGGTGGGACTGGGACTGAGGAGCACAAGAGAAAAACTAATGATCCTTTTCTTAAGCATGGGGGTCAGCAAAACATGTCAAAATCACCTAGATTGTACACACCTATTAAGAAGGAATGGTCAGAGAATTTGCCAAATGACAATGTGATTGATAATCAAGATAATCATACGAATAGGAATTATAAGAGCAAGAATACAGACTTAGTTAGTCACCCACATAATTCAAGACAGGAAAGGAATCAATTGACTATTGAGTCCAAGTATTATGGCTTAAATAGAGAAGTTGTTTCCAAGGTTGAAGAACAGTTCAGGTTAAGTAAAGAACTTAAGGGAAATGATTCTGAAATTTGGGGTCTGAAGTCTCTCTCTGACAAGAGTGTAAATCAGAACTCACTGAAAGTCTCAGGGGATATAAGCCATATGGGCAATGCTATAATCTCAAATAATGCACATCTTATTAGCAGCATAACTCAGAGTACTTCATCTGCTTATCATTATCCTCAATCTGTAAAGCAAACAAGGAAGGGAAAGGGGGTTATTTGTGAAGATTTAGACAAAAGCTTCAGCATTGTAGGAGCACATAAGAGCCAGGAGGATGAGAAACCTTTTGCAGCCAATTTTCAATCTGATACACTGAGGAGATCAAATGTTGACGATGATAATAAGCCTTTAGTGGAAGGAACTGTAGTGTCTGGTAGCAATGAAATCAACTTAAGAGAGTGGCTGAAATGTGAATGTCATAAAGTGAAGAAATTAAGAAAGATTCATATATTTAAGCAGGTATTGGAATCGGTTGATTTTGCACACTCCCAAGGACTTGTCTTGCTAGACTTTCAACCATCTTGTTTCACGTTATTGCCTTCAAGTAAGATTAAGTACATTGGTTCATATGGCCGACAACAGTTAGGAAATGAAGTCATAACCTGCAATGTGAATGGGAAAAGGCCTCTCGAACAGAATACCCGTGCTTGCCAAAGTTCGGGTACAAAACAGAAAAAACTATTTGAGGAGACAGGATCTTTTAGGCTGTCGCATCAATGCTCCTTTACTCATGACTGCAGGGCAATAGTGAATCAAACTGACTCTGACACAATCAGACCATTGGAATCAAGGAGTAAAGAAAGTATGTGCCAAAAGATTTCTAATTGTCAACATACTTTTACCAAAGAAAATCAGTTTATGCCTGCTTCAGTTCAGTTAGAAGAGAAGTCGTATTGTAGTCCAGAAATGCTGAATGATGGAGTCTGCACCTTGTCATCTAATATTTATAGCCTTGGAGTTCTTCTTTTTGAATTGCTGTGCAATATTGAGTCAGGGGAGGCGCATTCAACTGTGATGTTGGAGTTGTGTCATAGAATCTTACCGCCTAAATTTCTAGCAGAAAATCCAAAGGAAGCTGGCTTTTGTCTTTGGCTTCTGCATCCTGAACCATCCTCTCGCCCTAATGCTAGGATCATTTTAGAATCTGAGTTTATACGCCAATCAGAGGAATCAAGTTCTATAGATGATGTTGGAATATCTGATGATGAGGCTGAAACAGAAAAATTACTGCATTTTCTAACTTCAATCAAAAAAGAAAAGATAAAACAGGCAGCCAAGTTGGAAGAACAGCTACATTTGTTGAATGAAGATATTCAGGAGGTAGAAAGAAGTTATTCATTTGGGACAGATTCAGTATTTCCATTGGCACAAATGAAAATTTCTGAAGTGAGAGAGAACAATTTACATTTTCAAGATTCTTCTGGTTCAGACATCAGTAGATCCATTCAAAGGTCATTTGGTGATGAAGAAAGATTTATGGCTAACATAAGTCAGCTAGAGAATTCTTACTTTTCTACGAGAATCCAAGCCCTGCTAAAAGATTCACCTATTTCAAGCAACGATAAAAATCTGATGGAAAATAGATGGAGATTGCCTCAAGGAGAGCATGCTAATAAGGAGCCTAGAAGAATTCATAATTCTGTTGGTTGTCTAGGATCCTTCTTTGAAGGTTTATGCAAGTTCGCTCGTTACAGCAAGTTTGAAGAGCGTGGCAGATTAAGAAATGGAGATCTGCTTAGTTCATCCAATGTAATGTGTGCTTTAAGTTTTGACCGTGATGAGGACTACATGGCAGCAGGAGGAGTTTCAAAGAAAATCAAGATTTTTGACCTCAATGCTATTTCAAGCGATTCTGTTGACATCCAATACCCAGTGGTTGAGATGACAAATAAATCAAAGCTTAGCTGTGTGTGCTGGAACACCAGCATAAAAAATCATCTGGCATCTACTGACTATGATGGTGTGGTTCAGATGTGGGATGCAGACACTGGTCAGCCATTGTCCCAATACACGGAGCACCAAAAGAGAGCTTGGTCTGTTCATTTTTCTCTGGCAGACCCAAAAATGTTTGCTAGTGGAAGTGATGACTGCTCTGTCAAACTATGGAATATCAGCGAGAAAAATTCTCTGGGAACTATCAGGAACCCTGCCAATATATGCTGTGTTCAGTTCTCTTCTTACTCAACAAATCTTTTATTTTTTGGATCAGCTGATTTCAAGGTTTATGGTTATGATCTTCGTCACACTAGGATTCCATGGTGCACATTAACTGGTCATGGCAAAGCTGTTAGTTATGTAAAATTTATAGATGCTGAAGCAGTTGTCTCTGCTTCCACTGACAACTCTTTGAAGCTTTGGGACCTTAAAAAAACCAGCTCTACTGGTTTGTCATCTGATGCATGTGCCTTAACCTATAAAGGTCATAGTAATGAAAAGAATTTTGCTGGATTATCTGTTTTGGATGGATACATTGCATGTGGTTCAGAATCTAATGAGGTGTACTGTTATCACAAATCACTGCCAGTGCCAATTGCATCTCACAAATTTGAGTCAATTGATCCTATTTCTGGTCATCTAAGTAGTGGTGATAATAACGGACACTTTGTTTCTAGTGTTTGCTGGAGAAAGAAATCTAACATGCTTGTGGCCGCCAACTCAGTTGGAATTGTGAAACTGTTGCAGATGGTCTGA 3024 0.3859 MTTANGGTGTEEHKRKTNDPFLKHGGQQNMSKSPRLYTPIKKEWSENLPNDNVIDNQDNHTNRNYKSKNTDLVSHPHNSRQERNQLTIESKYYGLNREVVSKVEEQFRLSKELKGNDSEIWGLKSLSDKSVNQNSLKVSGDISHMGNAIISNNAHLISSITQSTSSAYHYPQSVKQTRKGKGVICEDLDKSFSIVGAHKSQEDEKPFAANFQSDTLRRSNVDDDNKPLVEGTVVSGSNEINLREWLKCECHKVKKLRKIHIFKQVLESVDFAHSQGLVLLDFQPSCFTLLPSSKIKYIGSYGRQQLGNEVITCNVNGKRPLEQNTRACQSSGTKQKKLFEETGSFRLSHQCSFTHDCRAIVNQTDSDTIRPLESRSKESMCQKISNCQHTFTKENQFMPASVQLEEKSYCSPEMLNDGVCTLSSNIYSLGVLLFELLCNIESGEAHSTVMLELCHRILPPKFLAENPKEAGFCLWLLHPEPSSRPNARIILESEFIRQSEESSSIDDVGISDDEAETEKLLHFLTSIKKEKIKQAAKLEEQLHLLNEDIQEVERSYSFGTDSVFPLAQMKISEVRENNLHFQDSSGSDISRSIQRSFGDEERFMANISQLENSYFSTRIQALLKDSPISSNDKNLMENRWRLPQGEHANKEPRRIHNSVGCLGSFFEGLCKFARYSKFEERGRLRNGDLLSSSNVMCALSFDRDEDYMAAGGVSKKIKIFDLNAISSDSVDIQYPVVEMTNKSKLSCVCWNTSIKNHLASTDYDGVVQMWDADTGQPLSQYTEHQKRAWSVHFSLADPKMFASGSDDCSVKLWNISEKNSLGTIRNPANICCVQFSSYSTNLLFFGSADFKVYGYDLRHTRIPWCTLTGHGKAVSYVKFIDAEAVVSASTDNSLKLWDLKKTSSTGLSSDACALTYKGHSNEKNFAGLSVLDGYIACGSESNEVYCYHKSLPVPIASHKFESIDPISGHLSSGDNNGHFVSSVCWRKKSNMLVAANSVGIVKLLQMV* 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01407 1007 MobiDBLite consensus disorder prediction 47 82 - -
Phac10g01407 1007 PANTHER PROTEIN SPA1-RELATED 2 12 1007 IPR044630 GO:0009640
Phac10g01407 1007 Coils Coil 528 555 - -
Phac10g01407 1007 ProSitePatterns Trp-Asp (WD) repeats signature. 758 772 IPR019775 -
Phac10g01407 1007 MobiDBLite consensus disorder prediction 1 34 - -
Phac10g01407 1007 ProSiteProfiles Trp-Asp (WD) repeats profile. 738 780 IPR001680 GO:0005515
Phac10g01407 1007 ProSiteProfiles Trp-Asp (WD) repeats profile. 867 907 IPR001680 GO:0005515
Phac10g01407 1007 ProSiteProfiles Trp-Asp (WD) repeats profile. 781 823 IPR001680 GO:0005515
Phac10g01407 1007 SMART WD40_4 732 771 IPR001680 GO:0005515
Phac10g01407 1007 SMART WD40_4 774 814 IPR001680 GO:0005515
Phac10g01407 1007 SMART WD40_4 860 898 IPR001680 GO:0005515
Phac10g01407 1007 SMART WD40_4 817 856 IPR001680 GO:0005515
Phac10g01407 1007 SMART WD40_4 959 1005 IPR001680 GO:0005515
Phac10g01407 1007 SMART WD40_4 909 948 IPR001680 GO:0005515
Phac10g01407 1007 SMART WD40_4 686 721 IPR001680 GO:0005515
Phac10g01407 1007 ProSiteProfiles Protein kinase domain profile. 93 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g01407 1007 Pfam WD domain, G-beta repeat 866 898 IPR001680 GO:0005515
Phac10g01407 1007 Pfam WD domain, G-beta repeat 775 814 IPR001680 GO:0005515
Phac10g01407 1007 ProSitePatterns Trp-Asp (WD) repeats signature. 885 899 IPR019775 -
Phac10g01407 1007 PRINTS G protein beta WD-40 repeat signature 801 815 IPR020472 -
Phac10g01407 1007 PRINTS G protein beta WD-40 repeat signature 885 899 IPR020472 -
Phac10g01407 1007 PRINTS G protein beta WD-40 repeat signature 758 772 IPR020472 -
Phac10g01407 1007 SUPERFAMILY Protein kinase-like (PK-like) 240 499 IPR011009 -
Phac10g01407 1007 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 867 900 - -
Phac10g01407 1007 Gene3D Transferase(Phosphotransferase) domain 1 238 507 - -
Phac10g01407 1007 Gene3D - 665 1007 IPR015943 GO:0005515
Phac10g01407 1007 SUPERFAMILY WD40 repeat-like 693 1003 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01407 Phac-Chr10 37192833 37199323 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01407 778 947 Miscellaneous Gene Families AT5G08390 26.744 3.28e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01407 K16240 - gmx:100799267 1576.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01407 10 37192833 37199323 Phac10g01407 10 37192833 37199323 ECH