Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01401 ATGGCGGCCTTCGACCACTTCGGGAACATGTACGACGTTGCATTCAAACCCCGCTTGCTTCTCTCCATCATCAGAGACCATATTCCGGATGAGAAGCGTGCCTTCTCCTACCCCTTCCAACTCTCCAAGGTTGTGTCACTCGTCAAAACGCACTCTCTTCTCTCTGAGTCTTTCTTGGTAGACTCCACGCCTCCCAAAATAATCGAAGCCTGGAAGTCTGCATTCTCTTCCTGGCTCAACCGCATATTCTCCCTCCTGTCCACCTCCATGCCTGATAAACGCTGGGCGGGGATCTCTCTGCTCGGGGTTACTTGTGAAGAGTGCAGCTCTGAGCGTTTTCTAGAATCTTACTCTGTGTGGTTCAACAAGTTGCTAGCTTTTCTACAGCATTTGATTGATATGCTTGTGTCTGGACAAATTGAGGAAGGGAGGAAGCATGTGAACTGGACAAGTTTTGCTTTAAGTCAGCTGGGTTTGTTTATCTGGGTGTTGGTTGGAATATCCAAGGAGATAGCTTTATGGTCCAAGAAGATTCGTGATTGCAGGGTCTGGAGTTTTTCGCAATTTGATGAGGCACTGCTGGTCAGAATTCAGGGCCACTGGTGTGGGAGAAGAACGTTTTGGAGGTTAGGAGGTGAAGGAAGCATGGATCTTAACAAGCTGTCTTTGGCAGTAGCTACTGTATTTGAGATGCAGCCAAACTTTTGGTTCAAAGACGAAATGTTAGGTCGATATCCTAAGATCAAGAAAGAATCGTCTTCCTGTGCTGTTAAAGTTGTTCAGCCTACATTGAAGATGTTAACTGATGAGAACTCAGAGGCAATATGTGATGCTGCAGTTCATTTGTTACGCACCATAGCAACTTCATTTCCGTTTTCTATTCGTAATCATTATGATAGTGTTGAATCTGCTGTCGCTTTAAAACTTTTGTCTGGAGGATGCAGTCTTGATATGTCGAAGTGGCGCCCATGCAAAACTGAAAAGGCAGCGGCAGCGCCCATGCCCATGGAAAATGAAGAGGCAGCTGTGCACATGAGAGAAGACAACCCTAATGTTAAACTCGCCCATTGCCTTGCACTGCTTCCAAAATCGAAAGGAAACAATGAATGCTGGTCAGTGTTGATGCAGAAAATTTTGGTGTTAATAAATGATCAATTAAATCTAGCCTTTCATGGGCTAGAAGAAGAAACCATGCGTGACAGTGTTACTAGGCTGCTGGTTTTACCAGGAAAACATCCTCCGCCACCGTTGGGAGGCTACATATTGGCAGAAGAAGTTAGAAACAAGGCATCACAAATGACTGAGCAATCACTGATCTCTAATGTATCTACCCTTATGTTGGGCTGTTGTCTAATGCTTACAAATACATATCCTGCTAAGGTAAATGTTCCTGTTCGCGTGTTAGTGGCCCTGGTTGATAGGATTCTGAAGGTAAATGGCTCTTTGCCACAAATGTCATTGCCATTCATGACTGCCAAGCAGCAAGAGAACATTTGTTCAGAACTTCCAGTTTTGCACTCGAGTAGCCTGGAATTGCTCACAGCTATCATAAAGTGTATGGGCAGTCAACTATTGCCATATGCTGCCAGTATTGTACGTATCATTACAAAGTACTTCAAGACATGTGAGTTGCCAGAGTTAAGGATTAAGTTCTATTCAGTCACGAGGGATTTGCTCATAACCATGGGTGCTGGAATGGCTTTATACCTTGCACAGGAAGTTGTCAACAATGCTTTTAGTGATTTAAGTAGTACTGAGGATATGGATGGTGGCATATTAAATGGTTCAAATTCAAATGCCTCTGCTGGAGCACAGCAACCGCCCAGTCATAGAAAAAGGAAGCACAGCAGTGCAACGGGATCCCTTCAGGAGCATGATGAAGGAGGTGGTTCAGGCGTGGAAGTTCCCAAGAATCGTCCATTGACTCCAATTTCTCTGAGAATAGCTGCACTCGAGACATTAGAGGCTCTTCTTATTGTGGCTGGAGCTTTGAAATCTGCACCATGGAGATCAAAACTTGATAGCCTTTTGATTGTCATTGCAACGGATTCTTTTAAGGAAGGAACAGTTTCTGAAGAACCTGCTGCCACTGTCACAGATTTGCAGCTTGCTGCATTGCGGACTTTACAAGCATCCTTTCTTTCATTTATTCGAGAACGACCTCCATATTTTTCTCAGGGTCTTGAACTTTTCCGTAGAGGGAAGCAACAAACTGCTGTACCAAAGCTAGCTGAGTTCTGTGCCCAAGCTCTGTTAACCTTGGAAGTGCTGATACATCCTAGGGCACTTCCATTGGTAGATTACGCCTATGCTCATAACAATTCAATGGGTGAAGCCCATGGTAGTCTCCAACATGAATATTCTGGCCGAAGCAACAGTACCCCATTTGGTTTACCGCAAGATACTCCTGACTACGATGATGCTCTTTGTGCTAGTTGGCTTGAAACTGGCCAAGAAGATGATGTGTCAATGGGTAAAGATGCAGAAAACAACCAAGAGCCTTCTGAAGCTTGCAGAGATAATGATCCTATAGTGCTTCCTGTGCATGTATCTTCTGACAAGGAGAGGAGCCAGATGGATTCTGAGGCTGCCACCCCTGCAGATGTTGAAATGAAAACTGTTGAGGATGAAACCAATTTGAAGTTAGATCAACCTGGAGAATCCGTGGTGCAATTTCAGGAACCTGGATCATGCACCACAAACATCCCATTGGTTGAAGCTCACAATGGTACATTTGATGATATAGTGTCTGAGAAGATTCTTTCAGACAGCACTGTTCCTCATAATGAAGCCAGTCATATGGAATCAGGCCAAGGAAACTCTGTTAACGAAGACTTTGCATTTGCTTCTCAGAGTAATAGCTTATGGCAAACAACCTCAGACTCTAATATTTTTCAGGATTTTGCTTTTAAATTGGATCATGGCAATCCACTGGCAGATGAAGATGGTTTTCCTGATATTGTGGATGGAGATCCAGATTCTGATTCCGCATAA 2994 0.4412 MAAFDHFGNMYDVAFKPRLLLSIIRDHIPDEKRAFSYPFQLSKVVSLVKTHSLLSESFLVDSTPPKIIEAWKSAFSSWLNRIFSLLSTSMPDKRWAGISLLGVTCEECSSERFLESYSVWFNKLLAFLQHLIDMLVSGQIEEGRKHVNWTSFALSQLGLFIWVLVGISKEIALWSKKIRDCRVWSFSQFDEALLVRIQGHWCGRRTFWRLGGEGSMDLNKLSLAVATVFEMQPNFWFKDEMLGRYPKIKKESSSCAVKVVQPTLKMLTDENSEAICDAAVHLLRTIATSFPFSIRNHYDSVESAVALKLLSGGCSLDMSKWRPCKTEKAAAAPMPMENEEAAVHMREDNPNVKLAHCLALLPKSKGNNECWSVLMQKILVLINDQLNLAFHGLEEETMRDSVTRLLVLPGKHPPPPLGGYILAEEVRNKASQMTEQSLISNVSTLMLGCCLMLTNTYPAKVNVPVRVLVALVDRILKVNGSLPQMSLPFMTAKQQENICSELPVLHSSSLELLTAIIKCMGSQLLPYAASIVRIITKYFKTCELPELRIKFYSVTRDLLITMGAGMALYLAQEVVNNAFSDLSSTEDMDGGILNGSNSNASAGAQQPPSHRKRKHSSATGSLQEHDEGGGSGVEVPKNRPLTPISLRIAALETLEALLIVAGALKSAPWRSKLDSLLIVIATDSFKEGTVSEEPAATVTDLQLAALRTLQASFLSFIRERPPYFSQGLELFRRGKQQTAVPKLAEFCAQALLTLEVLIHPRALPLVDYAYAHNNSMGEAHGSLQHEYSGRSNSTPFGLPQDTPDYDDALCASWLETGQEDDVSMGKDAENNQEPSEACRDNDPIVLPVHVSSDKERSQMDSEAATPADVEMKTVEDETNLKLDQPGESVVQFQEPGSCTTNIPLVEAHNGTFDDIVSEKILSDSTVPHNEASHMESGQGNSVNEDFAFASQSNSLWQTTSDSNIFQDFAFKLDHGNPLADEDGFPDIVDGDPDSDSA* 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01401 997 Pfam rRNA processing/ribosome biogenesis 37 130 IPR012583 -
Phac10g01401 997 MobiDBLite consensus disorder prediction 590 606 - -
Phac10g01401 997 MobiDBLite consensus disorder prediction 975 997 - -
Phac10g01401 997 MobiDBLite consensus disorder prediction 590 636 - -
Phac10g01401 997 MobiDBLite consensus disorder prediction 781 801 - -
Phac10g01401 997 SUPERFAMILY ARM repeat 69 540 IPR016024 -
Phac10g01401 997 MobiDBLite consensus disorder prediction 781 799 - -
Phac10g01401 997 MobiDBLite consensus disorder prediction 820 836 - -
Phac10g01401 997 MobiDBLite consensus disorder prediction 819 842 - -
Phac10g01401 997 PANTHER PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1 6 995 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01401 Phac-Chr10 37096772 37109492 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01401 - - gmx:100803198 1051.97