Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01357 ATGGCGGGAGATTCATCATGGATAAGCCACTTAGATGATGGAGCACGTAGGGAGACTAGGGAGTTTGATTCAGTTTTGGAATTTGGTGAGGAAGTTGATACTGAGGGAACTGCTGTTTCTGTGAACACAGTGTTACCTGATGAATTGGTGGAGCGAATCCTAGCCTATCTCCCCGTTGTAAGCATTTTCAGAGCAAGTTCTGTGTGTAAAAGATGGCATGAGATTGTTACTTCTGAAAGGTTTCTATGGAATCCTTCGAATTCATTGCCACAGAGACCTTGGTACTTTATGTTCACTTACTCAGATGAACCCACTGGTTATGCTTATGATCCCATCCTTCGGAAATGGTACGGCATTGAGCTTCCTTTCATCGAAACATCTAGCTGGTTCGTTGTTTCTTCTTATGGTTTAGTTTGCTTCATGGACAATGACAGCAGAAGCAAATTATGCATGTGTAACCCTATTACCAAAAGGTGCAGAAGGCTTGAGGGTCCTCCGGGTTTGAAATTTTCTGATTACAGTGCATTGGCAATGTCTGTGAACAGGAAATCCCACAGTTACACTCTGGCAATGGTGAAATCAAAACAAATCCCTGAGGATTTTGTCCAGTGGGAGATCTCAATTCATATATACCACTCACAGAAAGAGACCTGGATGACAACTTCAACAGAGGTTTTGATGGGGTGGAGAGGTGGTAATGAGAGTGTGATATGCAATGGTGTGTTATACTTTTTAGTCTACTCAGCTGGGATTGTTCCTTCAGAAAGTAGGCATGCACTGATTGCATATAATATCTCTAATCTCACTTCTCAAGCTACCTTGCGAAGGAGCTTTATTGCTGCACCCTGTTCACTAACATGTGGCCGTTTGATGAATATGAAGGAGAAGCTTGTTATGGTGGGAGGAATTGGTAAGCCAGATCGACCTGACATAATAAAAGGAATTGGCATCTGGGTTCTTAACGATAGGAAGTGGGAAGAGATTGTCCGAATGCCCCACAAATACTTCCAAGGCTTTGGGGAGTTTGATGATGTTTTTGCTAGCAGTGGTACTGATGATCAAATATATATTCAAAGTTATGGATCTCCAGCACTCCTCACATTTGATATGTATCTTAAACAGTGGAAATGGTCACAGAAATGCCCTGTAACAAAGAGGTTCCCTCTACAGCTATTCACTGGTTTTTGCTTTGAGCCTAGGCTTGAAATTGCTCCATAG 1218 0.4228 MAGDSSWISHLDDGARRETREFDSVLEFGEEVDTEGTAVSVNTVLPDELVERILAYLPVVSIFRASSVCKRWHEIVTSERFLWNPSNSLPQRPWYFMFTYSDEPTGYAYDPILRKWYGIELPFIETSSWFVVSSYGLVCFMDNDSRSKLCMCNPITKRCRRLEGPPGLKFSDYSALAMSVNRKSHSYTLAMVKSKQIPEDFVQWEISIHIYHSQKETWMTTSTEVLMGWRGGNESVICNGVLYFLVYSAGIVPSESRHALIAYNISNLTSQATLRRSFIAAPCSLTCGRLMNMKEKLVMVGGIGKPDRPDIIKGIGIWVLNDRKWEEIVRMPHKYFQGFGEFDDVFASSGTDDQIYIQSYGSPALLTFDMYLKQWKWSQKCPVTKRFPLQLFTGFCFEPRLEIAP* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01357 405 SUPERFAMILY F-box domain 43 144 IPR036047 GO:0005515
Phac10g01357 405 Pfam F-box-like 45 84 IPR001810 GO:0005515
Phac10g01357 405 Gene3D - 37 85 - -
Phac10g01357 405 PANTHER F-BOX FAMILY PROTEIN 22 402 IPR045048 -
Phac10g01357 405 FunFam F-box/kelch-repeat protein At3g61590 38 85 - -
Phac10g01357 405 ProSiteProfiles F-box domain profile. 39 86 IPR001810 GO:0005515
Phac10g01357 405 FunFam F-box/kelch-repeat protein At3g61590 family 91 389 - -
Phac10g01357 405 CDD F-box_AtFBW1-like 44 81 - -
Phac10g01357 405 SUPERFAMILY Galactose oxidase, central domain 106 383 IPR011043 -
Phac10g01357 405 SMART fbox_2 45 85 IPR001810 GO:0005515
Phac10g01357 405 NCBIfam F-box protein interaction domain 135 336 IPR017451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01357 Phac-Chr10 36227648 36231663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01357 - - gmx:100817678 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01357 10 36227648 36231663 Phac10g01357 10 36227648 36231663 ECH