Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01249 ATGGTTTCACTTGGGGCTGTGCATAGTGTGGTCTATGTGCTCCTGCTTTCGGTCACTTTGGTTTTGGGTGGGGACATAGTTCACCATGATGATGTTGCCCCCATAAGGCCTGGTTGTGACAACAACTTTGTTTTGGTAAAAGTCCCCACTTGGATTGATGGTGTGGAAAAAAGTGAGTATGTTGGTGTTGGTGCAAGATTTGGCCCTACATTGGAATCAAAAGAAAAACGTGCCAATCTTACCAGAGTTGTCATGGCTGATCCTCCTGATTGTTGTACAAAGCCTAAGAATAAACTCACCAGCGAGATAATTTTGGTGCACCGAGGAAAATGCAGTTTCACTACAAAGGCAAATATTGCTGATGAAGCTGGTGCTTCAGCCATCCTCATTATAAACTACCGTACAGAACTTTTCAAGATGGTTTGTGAAGAAAATGAAACTGATGTTGATATAGGAATACCTGCTGTCATGCTTCCCCAAGATGCTGGATTGACTTTGGAAAGGCACATTAAAAATAACTCCAATGTGTCCATACAGTTATACTCTCCATTGCGTCCATTGGTTGATGTTGCGGAAGTGTTTTTGTGGCTTATGGCTGTTGGTACCATTTTATGTGCTTCATATTGGTCTGCCTGGAGTGCTAGAGAAGCAGCTATTGAGCAAGAGAAGCTTTTAAAGGATGCTTCAGATGACTATATTAATACAGAAAATGTTGGTTCCAGTGGTTATGTGGAAATTAGTACTACAGCAGCAATTTTATTTGTCGTGATTGCTTCATGTTTCTTGGTTATGCTGTATAAATTAATGTCATTCTGGTTTGTTGAAGTTCTGGTGGTTCTGTTTTGCATTGGCGGGGTAGAGGGACTGCAAACTTGTTTGGTGGCCCTGTTATCATGTTTTAGATGGTTTCGTCAACCTGGCCAGACATTTGTGAAGATACCCTTCTTTGGAGCTGTTTCATATCTGACACTTGCTATTACTCCATTCTGCATAGTGTTTGCCGTGGTTTGGGCAGTTTATCGCCGTGCATCATGGGCTTGGATTGGTCAGGATATCCTCGGTATCACGTTGATAATTACAGTTCTTCAGATTGTTCGCATACCAAATCTAAAGGTTGGAACTGTTCTTCTCAGCTGTGCATTCCTATATGACATCTTTTGGGTGTTTGTCTCTAAATGGTGGTTCCATGAGAGTGTTATGATAGTGGTAGCTCGTGGTGATAAGAGTGGAGAAGATGGCATTCCCATGCTTCTCAAGATACCTCGTCTATTTGACCCTTGGGGTGGTTACAGTATCATTGGATTTGGGGACATAATCTTACCAGGACTTATAGTGGCATTTTCACTAAGGTATGATTGGTTGGCAAAGAAGAACCTTCGTGCTGGATACTTCTTGTGGGCAATGACTGCTTATGGTTTAGGTCTTCTCATCACATATGTGGCTTTGAACTTGATGGATGGGCATGGTCAGCCAGCTTTGCTTTATATAGTTCCATTTACACTTGGCACCTTTTTGTCATTGGGAAAAAAGAGAGGTGAGCTCAAGATATTATGGACAAGAGGGAAACCAGAAAGGCCTTGCTGTCATATCCAAGAGGATAATCAATCAATTAACAGCCACCATTGA 1626 0.4194 MVSLGAVHSVVYVLLLSVTLVLGGDIVHHDDVAPIRPGCDNNFVLVKVPTWIDGVEKSEYVGVGARFGPTLESKEKRANLTRVVMADPPDCCTKPKNKLTSEIILVHRGKCSFTTKANIADEAGASAILIINYRTELFKMVCEENETDVDIGIPAVMLPQDAGLTLERHIKNNSNVSIQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWSAREAAIEQEKLLKDASDDYINTENVGSSGYVEISTTAAILFVVIASCFLVMLYKLMSFWFVEVLVVLFCIGGVEGLQTCLVALLSCFRWFRQPGQTFVKIPFFGAVSYLTLAITPFCIVFAVVWAVYRRASWAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLIVAFSLRYDWLAKKNLRAGYFLWAMTAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKILWTRGKPERPCCHIQEDNQSINSHH* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01249 541 Pfam PA domain 89 166 IPR003137 -
Phac10g01249 541 SUPERFAMILY PA domain 98 136 IPR046450 -
Phac10g01249 541 Pfam Signal peptide peptidase 243 521 IPR007369 GO:0004190|GO:0016020
Phac10g01249 541 PANTHER SIGNAL PEPTIDE PEPTIDASE 69 529 IPR007369 GO:0004190|GO:0016020
Phac10g01249 541 SMART psh_8 242 511 IPR006639 GO:0004190|GO:0016020
Phac10g01249 541 Gene3D - 41 183 - -
Phac10g01249 541 FunFam Signal peptide peptidase-like 3 45 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01249 Phac-Chr10 34881984 34890454 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01249 K09597 - gmx:100795197 1031.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01249 10 34881984 34890454 Phac10g01249 10 34881984 34890454 ECH
Phac8g00909 8 5960319 5970230 Phac10g01249 10 34881984 34890454 PCT