Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01163 ATGGTTGTGGCAGATGCAAAAGAAAGATATGCTGTTGTGACAGGTGCAAACAAAGGGATAGGATTAGAGACTGTGAAAGGGCTTGCCTCAAATGGAATCAAGGTGGTGCTCACAGCCAGGGATGTGAAGAGGGGTTATCAAGCAGTTGAGGAATTAAAAAAAGAATTTGGCTTTTCTGGCCTTGTGGTGTTTCACCAGCTTGATGTCACTGATCCTGCAAGTATTGCATCTTTGGTTGAGTTTGTGAAGACCCAGTTTGGAAGACTTGATATATTGGTGAACAATGCAGGAATCAATGGGTTCAATACAGATGGCATGGTGCCATCAAAAATTAACTGGAAGGAGCTACCTCAAACTTGTGAGATGGCTAAAAATTGCCTAAGAACAAACTATTATGGTGCTAAGGAAACAACTGAGGCATTTCTTCCCCTTCTTCAGTTATCCAATTTACCAATGATTGTTAATGTTTCTTCTGAAGCAGGACTTTTAAAGTACATATCAAATGGATGGGCTAGGAGGGTGCTTGATGACACTGAAAATCTCAGTGAAGAGCTAATAGATGAGGTGCTGAAGGAGTACATGAAAGACTTAAAAGAAGGTTCACTAGAAAACAAAGGGTGGCCAACCTACCTGTCTGCATATATGGTCTCAAAAGCAGCCATGAATTCATACACAAGGCTTCTGGCCTATAGACACCCAAAATTGTGCATCAATTGTGTCTGTCCTGGTTTTGTTAAAACAGACATTAACAAAAACACTGGCATCTTATCTGTTGAAAATGGTGCTGCTAGTGTTGTGAGATTAGCACTCTTGCCTAATGGTTCCCCTTCTGGCCACTTCTTTACTCGACAACAAGTGTCAAGCTTTTGA 870 0.4115 MVVADAKERYAVVTGANKGIGLETVKGLASNGIKVVLTARDVKRGYQAVEELKKEFGFSGLVVFHQLDVTDPASIASLVEFVKTQFGRLDILVNNAGINGFNTDGMVPSKINWKELPQTCEMAKNCLRTNYYGAKETTEAFLPLLQLSNLPMIVNVSSEAGLLKYISNGWARRVLDDTENLSEELIDEVLKEYMKDLKEGSLENKGWPTYLSAYMVSKAAMNSYTRLLAYRHPKLCINCVCPGFVKTDINKNTGILSVENGAASVVRLALLPNGSPSGHFFTRQQVSSF* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01163 289 Gene3D - 3 289 - -
Phac10g01163 289 Pfam Enoyl-(Acyl carrier protein) reductase 204 253 - -
Phac10g01163 289 PRINTS Glucose/ribitol dehydrogenase family signature 214 233 IPR002347 -
Phac10g01163 289 PRINTS Glucose/ribitol dehydrogenase family signature 145 161 IPR002347 -
Phac10g01163 289 PRINTS Glucose/ribitol dehydrogenase family signature 87 98 IPR002347 -
Phac10g01163 289 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Phac10g01163 289 PRINTS Glucose/ribitol dehydrogenase family signature 233 250 IPR002347 -
Phac10g01163 289 FunFam (+)-neomenthol dehydrogenase 4 289 - -
Phac10g01163 289 CDD carb_red_PTCR-like_SDR_c 9 289 IPR045313 GO:0016616
Phac10g01163 289 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 214 233 IPR002347 -
Phac10g01163 289 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 IPR002347 -
Phac10g01163 289 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 IPR002347 -
Phac10g01163 289 Pfam short chain dehydrogenase 10 166 IPR002347 -
Phac10g01163 289 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 275 IPR036291 -
Phac10g01163 289 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 9 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01163 Phac-Chr10 33091947 33094924 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01163 4 251 Acyl Lipid Metabolism Gene Families AT1G63380 26.087 3.78e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01163 K15095 - gmx:111064653 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01163 10 33091947 33094924 Phac10g01163 10 33091947 33094924 ECH