Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01055 ATGGGATTTAGATCACGCACGCTAGAAATCACCGTTATCTCTGGTGAAAACGTGCGCATAATGGAGGACGCATACGTCGTCGTTCGGGCAGAGTCGCTCAACTGCTGCACCACCAGATCGGCCAAAGACCATGGCACCAACTTCCTCTCGTGGAACGAGAAGTTCCTGTTGGACGTGCCCATGCATGCAAGATCGATCACATTCGAGGTCCAATGCAGCAAATTCAAGGCTTTTCGCCCTCTTGGGGTGGCCAGAATCGCTGCCTCTGACTTCCTCGGGGACCCCGCCGTCCCGGAAAATCAGTTGCAAGAGTTGAGTTACGGGTTGAGGGACTGGGAAGGGAAGAGAAACGGGGTCATTCACTTCGCCGTGAGAGTGGTACCTCCGCCGCCACCAACGAAGGAGAAATGTCTGAAGCCCAGCGTGAAAGCGGTGGTGACCAGAAAGGGTTGCGGTGACGGAATGAAGGTCGGTGACAAGAAGAAGGAAGTTGTAGTCGGTGTCCCCTTTTGGTGTTCCTACCCTAACATTATTTTGAGAGGTTAA 546 0.5348 MGFRSRTLEITVISGENVRIMEDAYVVVRAESLNCCTTRSAKDHGTNFLSWNEKFLLDVPMHARSITFEVQCSKFKAFRPLGVARIAASDFLGDPAVPENQLQELSYGLRDWEGKRNGVIHFAVRVVPPPPPTKEKCLKPSVKAVVTRKGCGDGMKVGDKKKEVVVGVPFWCSYPNIILRG* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01055 181 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 135 IPR035892 -
Phac10g01055 181 PANTHER INGRESSION PROTEIN FIC1 6 140 - -
Phac10g01055 181 Pfam C2 domain 7 90 IPR000008 -
Phac10g01055 181 CDD C2_SRC2_like 7 122 IPR044750 GO:0006952
Phac10g01055 181 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
Phac10g01055 181 Gene3D C2 domain 4 145 IPR035892 -
Phac10g01055 181 SMART C2_3c 7 100 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01055 Phac-Chr10 31834321 31840165 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01055 - - gmx:100810797 248.054