Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01020 ATGGCGGATGCTGATCTCACCTCCCCGCTCCTCGCCTCCGATCACATCGTACTCACTGTGCACTCCTCTGCAGCTCCCTCCGCCGATGGCAACCCCTACCGCGCGCTCGGATGCGACGACGAGCTCGTCGTGCCGCCTACCGCAACCCTGGACCCCTTCCGCAACGGCACGCCGGTGATTGAGGGGCTTTACGAGTGGGCGAAGACGGTCCTGTGTCTGCCTTTGGCGCTGCTGCGGCTCGCGCTGTTCGGGATGTGCCTCGCCGTGGGGTATGTGGCGACGAAGGTGGCACTGCAAGGGTGGAAGGACAAGGAGAATCCCATGCCGAAGTGGAGGTGTAGGGTTATGTGGATCACAAGAATGTGCGCCAGATGCATTCTTTTTTCGTTTGGCTATCAGTGGATAAAACGGAAAGGAAAACCTGCACCAAGGGAAATTGCTCCTATAATTGTATCCAATCATGTATCATACATTGAACCTATCTTCTATTTCTACGAATTATTTCCCACTATTGTGGCATCTGAGTCTCATGACTCCATACCTTTTGTTGGCACAATTATAAGAGCAATGCAGGTCATATATGTTAACAGATTCTTACCATCATCAAGGAGGCAGACTATCAGGGATATAAAGAGAAGGGCCTCTTGTGATAAATTTCCTCGAGTACTGTTATTTCCTGAGGGAACGACAACTAATGGCAGGAACCTTATCTCCTTCCAACTTGGTGCATTTATCCCAGGATACCCAATCCAGCCTGTGATTGTACGCTATCCTCATGTGCACTTTGACCAATCCTGGGGTGATGTTTCTTTGGGGAAGCTTATGTTCAGGATGTTCACTCAATTTCACAACTTCTTTGAGATAGAATATCTTCCAGTTGTTTATCCCCTGGATGATAAGGAAACTGCTGTACATTTTCGGGAGAGGACTAGCCGTGCTCTTGCAACTGCATTGAATGCTGTCCAGACAGGACATTCTTATGGAGACATAATGCTTAATTTGAAAGCACAAGAAGCAAAACAGGAGAACCCTTCGAGTTATATGGTTGAAATGACTAAGTTGGAAGAATCATTTCATATCAGCAGCATGGAAGCTGTGGACTTTCTGGATAAATTCTTGTCCATGAATCCTGATCCCAGTGGTCGTGTCCAATATCATGACTTCTTGAGGGTTTTAAGACTTAAGGCTTGCCCGCTATCTGCAAAGATATTTTCATTCATTGATGTGGAGAAGTGTGGGACAATTACTTTCAGACAGGTAACTATCTGTGATGATGTACCACGTTTCTGTGCTATATAG 1299 0.4704 MADADLTSPLLASDHIVLTVHSSAAPSADGNPYRALGCDDELVVPPTATLDPFRNGTPVIEGLYEWAKTVLCLPLALLRLALFGMCLAVGYVATKVALQGWKDKENPMPKWRCRVMWITRMCARCILFSFGYQWIKRKGKPAPREIAPIIVSNHVSYIEPIFYFYELFPTIVASESHDSIPFVGTIIRAMQVIYVNRFLPSSRRQTIRDIKRRASCDKFPRVLLFPEGTTTNGRNLISFQLGAFIPGYPIQPVIVRYPHVHFDQSWGDVSLGKLMFRMFTQFHNFFEIEYLPVVYPLDDKETAVHFRERTSRALATALNAVQTGHSYGDIMLNLKAQEAKQENPSSYMVEMTKLEESFHISSMEAVDFLDKFLSMNPDPSGRVQYHDFLRVLRLKACPLSAKIFSFIDVEKCGTITFRQVTICDDVPRFCAI* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01020 432 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 43 350 - -
Phac10g01020 432 Pfam Acyltransferase 145 252 IPR002123 GO:0016746
Phac10g01020 432 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 121 305 - -
Phac10g01020 432 CDD LPLAT_LPCAT1-like 123 331 IPR045252 GO:0008374
Phac10g01020 432 SUPERFAMILY EF-hand 349 419 IPR011992 -
Phac10g01020 432 Gene3D - 342 426 - -
Phac10g01020 432 SMART plsc_2 148 258 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01020 Phac-Chr10 31389624 31399534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01020 98 321 Acyl Lipid Metabolism Gene Families AT1G80950 31.102 2.71e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01020 K13510 - gmx:100818109 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01020 10 31389624 31399534 Phac10g01020 10 31389624 31399534 ECH