Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00960 ATGGCTTCTCCGGAAGCCGATTCCCGTCTGAGTCTGGTCGTGGTTCCCGCGCTTGAGAAGATAATCAAGAATGCGTCGTGGCGGAAGCACGCCAAACTCGCTCATGAGTGCAAATCCGTCATCGAGAGGTTCGGCCACCAGCACCAGCACTTTCCGACGCCGGGATCTCCCTCCGACACCGAAGCGGAAGCCACCGTCCCTGGCCCGCTCCATGACGGCGGTCCATTGGAGTTCTCCTTGGCAGAGTCCGAGTCTATCCTCGCGCCTTTCATCAATGCTGCTGGCTCCGGCGTCCTCAAGATCGCTGATCCTGCCGTCGACGCCATTCAGAAGCTCATTGCGCATGGCTTCCTCCGCGGCGAGGTGGACCCGGACCCGGACTCCGCGGCTGCGGCGCCGGAGGCGAAGCTCCTGTCCAACCTCATAGAATCGGTCTGCAAATGCCACGATTTCGGCGACGAGGCGATGGAGTTGCTGCTCCTCAAGACCTTGCTCTCCGCAGTGACGTCAATTTCGCTCCGCATCCACGGTGATTCCTTGCTTCTCATTGTGCGGACCTGCTACGATATATATCTCGTGAGTAAGAATGTGGTGAATCAGACGACGGCGAAGGCGTCGCTGATCCAAATGCTGGTGATCGTGTTCCGCCGCATGGAGGCGGATTCCTCCACTGTGCCGATTCAGCCGATTGTAGTGGCGGAATTGATGGAGCCTGTGGAGAAATCCGATGGAGACAATTCAATGACGCAGTTTGTGCAGGGCTTTATAACGAAGATAATGCAGGACATTGACGGCGTTTTGAACCCTACGACGCCGAGTGGGAAGGTTAATTTGTTAGGTGGGCACGACGGTGCGTTTGAGACCACCACGGTGGAGACTACGAACCCTACTGATTTGTTGGATTCTACTGATAAAGACATGTTGGATGCTAAGTATTGGGAGATTAGTATGTATAAGACGGCGTTAGAGGGACGGAAGGGGGAGCTTGTGGATGGGGAAGTGGTGGAGAGAGACGATGATTTGGAGGTTCAGATTGGGAACAAGTTGAGGAGAGATGCTTTTTTGGTGTTCAGGGCGCTTTGTAAGTTGTCCATGAAGACGCCTCCGAAGGAGGTGGTAGGGGACCCGCAGTTGATGAAGGGAAAGATCGTGGCTCTGGAGTTGCTGAAGATTTTGCTGGAGAATGCTGGGGCCGTGTTCAGGACTAGTGAAAGGTTTTTAGGTGCCATCAAACAGTACTTATGTTTATCCTTGTTGAAGAACAGTGCTTCAACTCTTTTAATTGTATTTCAGCTGTCATGCTCCATTTTCATCAGTCTGGTGTCAAGATTTAGAGTTGGATTGAAAGCAGAAATTGGAGTATTTTTTCCTATGATAGTTCTCAGGGTCCTAGAAAATGTTTCTCAACCTAATTTTCAGCAGAAGATGATAGTGCTTCGATTTCTGGAAAAGCTCTGTGTTGATTCACAGATATTGGTCGACATATTTATAAACTATGACTGTGATGTCAATTCATCCAACATATTTGAGAGGATGGTAAATGGACTCCTTAAAACTGCACAAGGTGTTTCTCCTGGTGTAACAACCACGCTTTTGCCACCCCAGGAAGCAACACTAAAACTTGAAGCCATGAAAAGCTTGGTCGCAGTTCTAAAATCAATGGGGGACTGGATGAACAAACAATTGCGCATTCCGGACCCTCGTTCAGCCAAGAAAGTTGAAGCATTGGATAACAGCCCTGAATCTGGAGGTTTTACCATGGTAAATGGGAATGGAGAAGACCCTCCTGATGGATCTGACACTCAATCAGAAGTCTCCAATGATGCTTCTGATGTTTCAAATATTGAGCAACGCCGGGCTTATAAACTGGAACTCCAGGAAGGTATATCACTTTTTAATAGGAGGCCTAAGAAAGGAATTGAGTTTCTCATCAATGCCAACAAGGTGGGTGATTCACCAGAGGATATAGCTGCTTTTCTTAAAGAAGCATCCGGGTTGAACAAGACTTTGATTGGTGATTACCTGGGAGAAAGAGAAGAGTTACCCTTGAAGGTAATGCATGCCTATGTGGATTCCTTTAACTTTCAAGGTATGGAGTTTGATGAGGCAATCAGGGTCTTTCTTCAAGGATTTAGACTGCCTGGTGAGGCACAGAAAATTGATAGGATCATGGAAAAGTTTGCTGAACGTTACTGCAAATGTAATTCAAAGGCCTTTTCTAGTGCTGACACAGCTTATGTTCTTGCCTATTCTGTTATAATGCTTAATACCGATGCTCACAATCCCATGGTGAAGAATAAGATGTCTCCTGATGATTTCATAAGAAACAATCATGGCATTGATGATGGAAAAGATCTGCCTGAGGAATACTTGAAGTCCTTGTTTGACAGAATATCTAGAAATGAGATCAAAATGAAAGAAAATGATGAGTCTCCTCTACAAAAGCAGGCTGTGAACCCTAATCGACTTTTAGGCTTGGATAGTATATTGAATATTGTGATCCGCAAACGTGGTGAAGAGAATATGGAGACCAGTGATGATCTTATCCGTCATATGCAAGAACAATTCAAAGAAAAAGCTCGCAGATCTGAATCAATTTATTATGCAGCAACAGATGTTGTAATCCTTAAATTCATGATTGAGGTGTGCTGGGCACCGATGTTAGCCGCCTTCAGTGTTCCTCTTGATCAAAGTGACGATGAGGTTGTAATATCTCTGTGTCTTGAAGGCTTCCGCCATGCGATTCATGTTACTTCAGTAATGTCGATGAAGACTCATAGAGATGCTTTTGTGACGTCATTAGCAAAGTTTACCTCACTACATTCACCAGCAGATATTAAGCAGAAAAATGTCGATGCAATTAAGGCAATAGTTGTTATTGCTGATGAAGATGGAAATTACTTACAAGAAGCTTGGGAACATATCTTGACTTGCGTTTCTCGGTTTGAGCATTTACATCTTCTTGGAGAGGGGGCTCCACCAGATGCCACATTCTTTGCATTTCCTCAGAATGATTCAGAAAAAACTAAGCAAGCAAAGTCAACCATTCTTCCTGTTTTGAAGAAGAAGGGACTTGGGAGGATGCAGTATGCAGCTGCTTCATTGATGCGGGGTTCATATGATAGCGCTGGAATTGGTAGTACTGGTTCTGGAGTCACATCAGAACAGGTGAACAGTCTAGTTTCTAATTTAAATATGTTGGAACAAGTTGGAAACTCTGAAATGAGTCGCATATTCACTCGGAGTCAGAAGTTGAACAGTGAGGCCGTAATAGATTTTGTTAAGGCTCTGTGCAAGGTCTCCATGGAGGAACTGAGGTCTCCATCTGATCCACGTGTTTTTAGCCTTACAAAGATTGTTGAGATTGCGCACTACAATATGAACCGCATAAGACTTGTGTGGTCAAGCATCTGGCATGTTCTCTCTGATTTCTTTGTAACTATTGGTTGTTCTGCAAACCTTTCAATTGCCATTTTTGCAATGGATTCCTTGCGTCAGTTATCAATGAAATTTCTGGAGCGGGAAGAGCTGGCTAATTATAATTTTCAAAATGAATTTATGACACCTTTTGTCATTGTTATGCGAAAGAGTAGAGCTGTTGAAATCAGAGAATTAATTATCAGATGTATCTCTCAAATGGTTCTATCTCGTGTAAACAATGTCAAATCAGGATGGAAGAGCATGTTCATGGTATTCACAACAGCAGCTTACGATGACCACAAAAACATTGTACTCTTGGCTTTTGAAATGATTGAGAAGATTATTCGCGATTACTTCCCATGCATCACTGAGACTGAGACTACAACCTTCACAGACTGTGTAAATTGTCTAATTGCGTTTACCAATAGTAGATTCAATAAAGAGATTAGCCTAAATGCCATTGCTTTTCTTCGGTTTTGCGCAACAAAACTTGCAGCGGGAGACCTTGGCTCATCATCAAGGAATAAGGATAAGGAACTTTCTGGAAAGGTTTCCCCATCTTCACTTCAAACAAGGAAGGAGGGGAAAAATGAAAATGGAGAGGCTGCTGACAAGGATGATCATCTCTATTTCTGGTTTCCTTTATTGGCAGGTTTATCTGAGCTTAGCTTTGACCCAAGACCTGAGATTAGGAAGAGTGCCTTGGATGTCCTGTTTGAAACCTTACGCAACCATGGCCATCTTTTTTCGCTAAATTTATGGGAAAGAGTATTTGAGTCTATCTTATTTCCAATATTCGATTACGTTCGACATGCTATTGATCCTTCAGGGAGTAGTTCACCAGTAAATGAAGTAGAGGCAGATGATGGTGAGCATGATTCAGATGCTTGGCTTTACGAGACATGCACATTGGCCCTCCAATTGGTTGTAGATCTTTTTGTTAACTTTTACAACACTGTCAATCCACTTTTAAGAAAAGTGTTGTTGCTCCTGGTTAACTTTATAAATCGCCCTCATCAAAGCCTTGCAGGCATTGGTATTGCGGCTTTTGTTCGTTTGATGAGTAATGCGGGGGAGCTATTTTCTGATGAAAAGTGGTTAGAAGTGGTTTTCTCATTAAAAGAAGCAGCAAAGGCAACACTTCCTAACTTTTATTTTCTGGAAAGCGAGGACTTCACTAGAAGTCATGAGGATGCTTCAATCACTGATGATAGAGATGTTGCTGAATCTGGCTTTCCAGATAATTTAGTCAACTTGAGGACTCGTCGTGTTTATGCTCACTTAACTGATGCAAAATGCCGAGCTGCTGTTCAGCTTTTATTGATTCAGGCGGTGACGGAGATCTATGCCATGTATCGTTCTCACCTTCCAGCAAAAGCCATGCTAGTCCTGTTTGATGCTTTGCACGCTATAGCATTACACGCGCATCAGATTAACAACAATACCATATTACGTTCAAAGCTTCAAGAGTTTGGTTCTATGAGCCAAATGCAAGACCCTCCACTCTTACGCCTTGAGAATGAATCGTACCAGATCTGCCTTACATTTTTACAAAACCTTGTCATTGACAAGCCTCCTAGCTATGAGGCGGATGAGGTTGAATCTCATCTCATTCAGCTTTGTCAGGAGGTTTTGGAGTTTTATATTGAAGTTGCAGGTTTTGGACAAAAATCTGAATCTTCTCATGTTCGAGAGCCACATTGGTATATTCCCTTGGGCTCCGGGAAGAGTAGAGAATTGGCTTCTCGTTCACCTCTCATTGTGGCTACTCTGCACGCTATTTGTAGTTTGGGAGATATTTCCTTTGAGAAGAACCTGTCTCATTTCTTCCCTCTTATTTCTAGCTTGGTACGTTGTGAACATGGGTCCAAGGAAGTCCAGGTTGCTCTCAGTGACATGCTTACTTTATCAGTTGGTCCTGTTTTGCTACAGTCATGTTGA 5361 0.4384 MASPEADSRLSLVVVPALEKIIKNASWRKHAKLAHECKSVIERFGHQHQHFPTPGSPSDTEAEATVPGPLHDGGPLEFSLAESESILAPFINAAGSGVLKIADPAVDAIQKLIAHGFLRGEVDPDPDSAAAAPEAKLLSNLIESVCKCHDFGDEAMELLLLKTLLSAVTSISLRIHGDSLLLIVRTCYDIYLVSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPIQPIVVAELMEPVEKSDGDNSMTQFVQGFITKIMQDIDGVLNPTTPSGKVNLLGGHDGAFETTTVETTNPTDLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGEVVERDDDLEVQIGNKLRRDAFLVFRALCKLSMKTPPKEVVGDPQLMKGKIVALELLKILLENAGAVFRTSERFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRVGLKAEIGVFFPMIVLRVLENVSQPNFQQKMIVLRFLEKLCVDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVSPGVTTTLLPPQEATLKLEAMKSLVAVLKSMGDWMNKQLRIPDPRSAKKVEALDNSPESGGFTMVNGNGEDPPDGSDTQSEVSNDASDVSNIEQRRAYKLELQEGISLFNRRPKKGIEFLINANKVGDSPEDIAAFLKEASGLNKTLIGDYLGEREELPLKVMHAYVDSFNFQGMEFDEAIRVFLQGFRLPGEAQKIDRIMEKFAERYCKCNSKAFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSPDDFIRNNHGIDDGKDLPEEYLKSLFDRISRNEIKMKENDESPLQKQAVNPNRLLGLDSILNIVIRKRGEENMETSDDLIRHMQEQFKEKARRSESIYYAATDVVILKFMIEVCWAPMLAAFSVPLDQSDDEVVISLCLEGFRHAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNVDAIKAIVVIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKTKQAKSTILPVLKKKGLGRMQYAAASLMRGSYDSAGIGSTGSGVTSEQVNSLVSNLNMLEQVGNSEMSRIFTRSQKLNSEAVIDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSANLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMTPFVIVMRKSRAVEIRELIIRCISQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEMIEKIIRDYFPCITETETTTFTDCVNCLIAFTNSRFNKEISLNAIAFLRFCATKLAAGDLGSSSRNKDKELSGKVSPSSLQTRKEGKNENGEAADKDDHLYFWFPLLAGLSELSFDPRPEIRKSALDVLFETLRNHGHLFSLNLWERVFESILFPIFDYVRHAIDPSGSSSPVNEVEADDGEHDSDAWLYETCTLALQLVVDLFVNFYNTVNPLLRKVLLLLVNFINRPHQSLAGIGIAAFVRLMSNAGELFSDEKWLEVVFSLKEAAKATLPNFYFLESEDFTRSHEDASITDDRDVAESGFPDNLVNLRTRRVYAHLTDAKCRAAVQLLLIQAVTEIYAMYRSHLPAKAMLVLFDALHAIALHAHQINNNTILRSKLQEFGSMSQMQDPPLLRLENESYQICLTFLQNLVIDKPPSYEADEVESHLIQLCQEVLEFYIEVAGFGQKSESSHVREPHWYIPLGSGKSRELASRSPLIVATLHAICSLGDISFEKNLSHFFPLISSLVRCEHGSKEVQVALSDMLTLSVGPVLLQSC* 1787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00960 1786 Pfam BIG2 C-terminal domain 1577 1774 IPR046455 -
Phac10g00960 1786 Gene3D - 613 695 - -
Phac10g00960 1786 CDD Sec7 621 803 IPR000904 GO:0005085|GO:0032012
Phac10g00960 1786 Gene3D - 696 817 IPR023394 -
Phac10g00960 1786 MobiDBLite consensus disorder prediction 568 612 - -
Phac10g00960 1786 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 350 508 IPR032691 -
Phac10g00960 1786 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 221 IPR032629 -
Phac10g00960 1786 ProSiteProfiles SEC7 domain profile. 614 801 IPR000904 GO:0005085|GO:0032012
Phac10g00960 1786 Pfam Sec7 domain 622 803 IPR000904 GO:0005085|GO:0032012
Phac10g00960 1786 MobiDBLite consensus disorder prediction 47 73 - -
Phac10g00960 1786 Pfam C-terminal region of Mon2 protein 1351 1412 IPR032817 -
Phac10g00960 1786 SUPERFAMILY ARM repeat 385 1517 IPR016024 -
Phac10g00960 1786 MobiDBLite consensus disorder prediction 1309 1342 - -
Phac10g00960 1786 MobiDBLite consensus disorder prediction 595 612 - -
Phac10g00960 1786 SMART sec7_5 618 803 IPR000904 GO:0005085|GO:0032012
Phac10g00960 1786 Pfam Domain of unknown function (DUF1981) 1170 1252 IPR015403 -
Phac10g00960 1786 SUPERFAMILY Sec7 domain 618 811 IPR035999 GO:0005085|GO:0032012
Phac10g00960 1786 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 77 1651 - -
Phac10g00960 1786 FunFam Brefeldin A-inhibited guanine nucleotide-exchange 1 696 815 - -
Phac10g00960 1786 FunFam Brefeldin A-inhibited guanine nucleotide-exchange protein 1 604 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00960 Phac-Chr10 29839286 29854670 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00960 K18442 - gmx:100778814 3179.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g01109 8 7775249 7790226 Phac10g00960 10 29839286 29854670 PCT