Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00644 ATGATGAAAATGAGGACAAAGCAAAGTTTTTTGTGGTGTGTATGGATTTTGCTTTGTGGGTCTTGTGTGGGAACGTTTGTGGTGGAGAAGAACAATTTGAAAATCACTTCTCCAAATTCATTGAAAGGTATATATGAATGTGCAATTGGGAATTTTGGGGTCCCCAAGTATGGAGGAACCATGATTGGCTCAGTGGTGTACCCCAAGACTGATCAGAATGGATGTAAACCCTTTGATTCCTCGTTGAGTTCCAAGCCCGGAACCTTCCCCAGCTTTGTTCTTATTGATCGAGGAGAGTGCTTCTTCACTTTGAAGGCGTGGAATGCACAGAAAGGTGGAGCAGCGGCCATTCTTGTCGCAGATGATAGGACAGAACCATTGATCACCATGGACACACCTGAAGAAGGAAATGGTGCCAGCAATGACGATTATATTGAGAAGATCAACATTCCTTCTGCCCTTATCAGCAAATCACTAGGGGATAAAATCAAGAGTGCTCTCTCTAGTGGGGAAATGGTTAATGTAAATCTTGATTGGAGAGAAGCCCTTCCTCACCCTGATGAGAGAGTTGAGTACGAGTTTTGGACAAGTAGCAATGATGAGTGTGGACCAAAGTGTGAAAGTGAAATCAACTTTGTCAAGGGTTTTAAAGGGGCAGCTCAATTACTAGAGCAGAAAGGGTTTGCAAAGTTTACCCCTCACTATATAACTTGGTATTGTCCAGAAGCATTTATACTGAGCCAACAGTGCAAGTCCCAGTGCATAAATAATGGGAGATACTGTGCACCAGATCCTGAGCTAGATTACAAAAGAGGGTACAGTGGTAGAGATGTTGTTATCCAAAACTTACGTCAAGTATGCTTCTTTAAAGTGGCAAATGAAAGTGGAAAGCCTTGGCAATGGTGGGACTACGTCACTGACTTTTCAATCCGCTGCCCAATGAGAGAGAATAAGTATACTGAAGAATGCTCAGATCAAGTTATCAAATCTCTTGGAGTTGATTTGAAGAAAGTTAAAGATTGTGTTGGAGATCCTACTGCGAATGTGGATAACCCTGTTCTCAATAATGAACAGGACTCACAGATTGGTAACGGCGATCGTGGAGATGTTACTATACTACCTACTCTTATTATAAACAACAGACAATATAGAGGTAAGCTGTCAAAAGCAGCAGTACTGAAGGCAATCTGTTCAGGTTTCCAAGAGACTACCGAGCCATCAATTTGTTTAACTCCAGACATGGAAACTAATGAGTGTTTGCAAAACAATGGTGGTTGTTGGCAGGACAATGCTGCTAACATTACTGCGTGCAGGGACACTTTCAGAGGAAGAATATGTGAATGCCCAGTTGTACAAAATGTCCAGTTTGTTGGTGATGGATATACCCATTGTGAAGCTACAGGCGCCTTGAGGTGTGCAATCAACAACGGAGGTTGTTGGAAAGAAACCCAAGGTCGCACAACTTTCTCTGCTTGTATTGATGACCACACCAAAGGTTGCAAGTGTCCACCTGGATTCAGGGGAGATGGAGTCAACTCCTGTACAGATGTGGACGAATGCAAGGAGAAATTGGCCTGCCAGTGCCCAGAATGTCACTGCAAAAATACTTGGGGAAGTTATGAATGCTCATGTAGTGATGGTTTGTTCTACACGCGAGAAAATGATATGTGCATTGGAAAATATGCTGCGTCAGTGGCCGGTGGGGGCATTGTTTGGATGGTTCTTCTGATCTTGGTTGTTGCTGGTGCTGGAGGGTATGCATTTTACAAATACAGAATCCGGAGATACATGGACTCTGAGATAAGGGCAATTATGGCCCAATATATGCCCTTGGATAATCAACCGGAGACTTCTACTCAAACTCATGAAGATGTCTAG 1878 0.4313 MMKMRTKQSFLWCVWILLCGSCVGTFVVEKNNLKITSPNSLKGIYECAIGNFGVPKYGGTMIGSVVYPKTDQNGCKPFDSSLSSKPGTFPSFVLIDRGECFFTLKAWNAQKGGAAAILVADDRTEPLITMDTPEEGNGASNDDYIEKINIPSALISKSLGDKIKSALSSGEMVNVNLDWREALPHPDERVEYEFWTSSNDECGPKCESEINFVKGFKGAAQLLEQKGFAKFTPHYITWYCPEAFILSQQCKSQCINNGRYCAPDPELDYKRGYSGRDVVIQNLRQVCFFKVANESGKPWQWWDYVTDFSIRCPMRENKYTEECSDQVIKSLGVDLKKVKDCVGDPTANVDNPVLNNEQDSQIGNGDRGDVTILPTLIINNRQYRGKLSKAAVLKAICSGFQETTEPSICLTPDMETNECLQNNGGCWQDNAANITACRDTFRGRICECPVVQNVQFVGDGYTHCEATGALRCAINNGGCWKETQGRTTFSACIDDHTKGCKCPPGFRGDGVNSCTDVDECKEKLACQCPECHCKNTWGSYECSCSDGLFYTRENDMCIGKYAASVAGGGIVWMVLLILVVAGAGGYAFYKYRIRRYMDSEIRAIMAQYMPLDNQPETSTQTHEDV* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00644 625 ProSitePatterns Calcium-binding EGF-like domain signature. 516 542 IPR018097 GO:0005509
Phac10g00644 625 Gene3D Laminin 410 457 - -
Phac10g00644 625 Gene3D Laminin 469 558 - -
Phac10g00644 625 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 4 621 - -
Phac10g00644 625 Pfam PA domain 63 163 IPR003137 -
Phac10g00644 625 SMART egfca_6 516 558 IPR001881 GO:0005509
Phac10g00644 625 FunFam Vacuolar-sorting receptor 1 23 186 - -
Phac10g00644 625 SUPERFAMILY PA domain 92 172 IPR046450 -
Phac10g00644 625 CDD EGF_CA 516 547 - -
Phac10g00644 625 Gene3D - 23 186 - -
Phac10g00644 625 FunFam vacuolar-sorting receptor 1 409 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00644 Phac-Chr10 8021299 8027371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00644 15 625 Miscellaneous Gene Families AT3G52850 69.643 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00644 - - gmx:100815266 1224.54