LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac10g00564	ATGAGTGAAGAGTCTGATTCTAAAGTTGAGGCTATGGATCTCTTACGCCAATTGGAGGATATCCTTGAATCTGATGCTCTAATTGACGAACTGGGCTTTATTCACCCCTCACAATTTCCCTTGCTAAAGGAAGAATCAGACGTTTCGTCTAATTTATCTTATGAAGCTAGCCATCAATCAGAAGATGGAGTAGTAAGCTCCGTGGAATCTTCCAAACAAGACAACATATATTTCTGGAACAGAGATCATAAATTGGGAATTTCAACTCATGTTCTTCTACCGTTATATAGAACAGTTAAACATGCATTTATGATTACATTTAAACAATACAGAATGTGTGACAACCAATCTGACAAAGTTGGAATTTGTTTACCTGCCTCTTCTTGTGATCATCTTGAGAGTACCCTTCTGAGACACAGCAAGTCTCTTCTGGTGCTAAGCTGTGATTTTATGACAGCTTGGAATTGCAGAAAGTTAATAGTATCCAAGAAGCAGCAGCTCTCAATGTTTGTAGATGAACTTCTCCTGTCAGAACTTGTACTCTCATATTCACCCAAAAGCGAACAAGCTTGGAATCATAGGCGATGGGTGATCAAGTCAATCTCTGCAAACTGTTCAAATTTCAAAGAGATATTGGGAAAAGAATCTGAGCTGGTGGAAAAAATAGCTGAGAGATCAAAAATGAATTATCGTGCATGGAATCACCGTTGCTGGTTAGTCTCATACATGACCATTGAACAGGTTCTGTGTGAGTTAAAGAAATCCAGAAGTTGGGCTGCACTTCATGTTGCTGATAATTGTTGTTTTCATTATCGCAGAAAACTATTACTGAAAATGATGGAGGGTCAAAGTTGTCTGGATGATACTGTATCTTGTGGTCATAATGTTAATATAGTCCAAGCCTTGAAGGATGAGCTTGATTGGAATGAAACACTGATAAAACGTTATGTTGGAAGAGAGGCTCTATGGCTTCATCGTCGCTTCCTTTCCATGTGCTGGATAAATAATTTTGTACCTGATTCTGGTGATGAGTCCTACCATTCGAAGGAGGCAACCGGCCTGTATCATGACTTTGGCACCTTTCTGCAGAATGAATTGTGTCTTCTCCACTCCTGCTCAACTTTTGTTGATGATGATTTTGTGGATGTCCAAGCACAAGCTGCACATTCTGCCTGTTACATTCTGTGGTTGAAAGTGCAAGTCCCCAAGCCTCTGGTGAATGAGCTCCAAGAGAAGATAAGAGATGTTGATCTGAAGACTTTTCTGAATAAGTCATGCCCAGAGAGATCCTCACTGTTCAATTACTTCATCAACTAG	1317	0.3979	MSEESDSKVEAMDLLRQLEDILESDALIDELGFIHPSQFPLLKEESDVSSNLSYEASHQSEDGVVSSVESSKQDNIYFWNRDHKLGISTHVLLPLYRTVKHAFMITFKQYRMCDNQSDKVGICLPASSCDHLESTLLRHSKSLLVLSCDFMTAWNCRKLIVSKKQQLSMFVDELLLSELVLSYSPKSEQAWNHRRWVIKSISANCSNFKEILGKESELVEKIAERSKMNYRAWNHRCWLVSYMTIEQVLCELKKSRSWAALHVADNCCFHYRRKLLLKMMEGQSCLDDTVSCGHNVNIVQALKDELDWNETLIKRYVGREALWLHRRFLSMCWINNFVPDSGDESYHSKEATGLYHDFGTFLQNELCLLHSCSTFVDDDFVDVQAQAAHSACYILWLKVQVPKPLVNELQEKIRDVDLKTFLNKSCPERSSLFNYFIN*	439

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac10g00564	438	FunFam	Protein prenyltransferase alpha subunit repeat-containing protein 1-B isoform D	106	416	-	-
	Phac10g00564	438	Gene3D	Protein prenylyltransferase	108	369	-	-
	Phac10g00564	438	Pfam	Protein prenyltransferase alpha subunit repeat	172	199	IPR002088	GO:0008318\|GO:0018342
	Phac10g00564	438	Pfam	Protein prenyltransferase alpha subunit repeat	302	329	IPR002088	GO:0008318\|GO:0018342
	Phac10g00564	438	Pfam	Protein prenyltransferase alpha subunit repeat	215	243	IPR002088	GO:0008318\|GO:0018342
	Phac10g00564	438	PANTHER	PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT	29	435	-	-
	Phac10g00564	438	ProSiteProfiles	Protein prenyltransferases alpha subunit repeat profile.	169	203	IPR002088	GO:0008318\|GO:0018342
	Phac10g00564	438	SUPERFAMILY	Protein prenylyltransferase	135	335	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac10g00564	Phac-Chr10	7049684	7055363	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac10g00564	K14137		-	gmx:100807426	752.281