Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00549 ATGTATCTATTTGTGAACTTCATTTGTTTCTACTCAAACATATTTGGATACGAGACAAAGAAAGTAATACCATTACCTGAAGTCACTTGTGTAAGGAGGGCAAAGACAGCTGGGATATTTCCCAATGCCATTGAAATTCAAGCTGGAAACAGGAAGCACTTTTTTGCATCCTTCCTATCCCGGGATGAAGCTTTTAAGATTATTAATGATGGATGGTCACGACAGGGCAATGGAGCCATAATCATGGAGCAGAAGGAGTCAATGTCTGAGTCTACTAGCCAAGAGAATGGATTTGTAGCTGTTGAAAATGTCAACATTTCTGATATACCTGACAATACATCAGTCTCTACTGACCTGAGCCCAGATGCAAGGTCTCCATCCATTGTAGATGTCCCTGTATTGGTGGGGGATTCAGAGAAGCAATGCAGTGTACAACACGTTGCTGAACTTGAATTGAACAATGATGCCCCAAGTGAGAGTTGGAAGTGGAACGAGGAGGATATTGATGCCCCATCAATCGATGAAGCATTTACATGCGTTGCAGAAGAAGTGTTTCCGATAAAGGTTGAAGACTTCTTTAGGTACTTTTTCTCAGATGATGCTGTAAATTTTCTTGAGTCTTTTCACAAAAAATGTGGTGATAAAGACTTTAAGTGTGGTTCGTGGCATCCTCAGGAGAAATTTGGGTATACTCGGGAACTGTCATTTCAACATCCAATAAAAATTTATCTTGGAGCAAAATTTGGTGGCTGCCATGAGGTCCAGAAATTTCGTGTTTATAAGAACAGTCATTTGGTCGTAGAGACATCTCAAGAAGTCAGTGATGTACCTTATGCAGATTATTTCCGTGTTGAGGGGCTGTGGAATGTAGAGAGAGACAAGGATGAATCAAAAGAATGCTGCATTATGCGCGTATTTGTGAATGTGGCATTTTCTAAAAAAACTATTTGGAAAGGCAAAATCGTACAATCAACAGTTGAAGAATGTCGTGATGCTTATGCTACATGGATCAACATGGCACATGAAATATTGAAGGAGAAGAATCTTGAAAAACAAGGTCAAAACGGTGAAATGAATTTAGATAGAGAAGTTAAGACTGGACAATCTTCAGAAGGGTCACAGGAGCAAAGTAACATTACAAAGATACTACCTACATCCAATGCCTTGGATGCTACTACTACTACCCACGATGTAGGCTCTCACTTGCAGGGGAATTTCACCGAACCATCATCTGTTCCATTGTTTATACAGTTTATGACAAAGCTCAGATCATCCTTGAAAAGTCATAACAATCTTTCTCTGCTTCTTGTCATTATTATCGCCCTGATTTTCTTCATTCAGCAGTTTAGCATACTTGTGCTATTGGCAAGACCTCAACACGTACACATGAACACTCCTGTAGAGTTCATGAATACGATGAACAATGGCATGACTAGAAATCCTTCAGACATAGCGTGGATGGAGAAAAGAATTCATCACCTTAAAGACGAGATGTACATGGTTGAGAGTAGGCTTGAAAGGATGCGGTATGAACATTCAGTTTTGAAAAAACAACTAAAGGACCTAGAACAACACAAGTAG 1581 0.3966 MYLFVNFICFYSNIFGYETKKVIPLPEVTCVRRAKTAGIFPNAIEIQAGNRKHFFASFLSRDEAFKIINDGWSRQGNGAIIMEQKESMSESTSQENGFVAVENVNISDIPDNTSVSTDLSPDARSPSIVDVPVLVGDSEKQCSVQHVAELELNNDAPSESWKWNEEDIDAPSIDEAFTCVAEEVFPIKVEDFFRYFFSDDAVNFLESFHKKCGDKDFKCGSWHPQEKFGYTRELSFQHPIKIYLGAKFGGCHEVQKFRVYKNSHLVVETSQEVSDVPYADYFRVEGLWNVERDKDESKECCIMRVFVNVAFSKKTIWKGKIVQSTVEECRDAYATWINMAHEILKEKNLEKQGQNGEMNLDREVKTGQSSEGSQEQSNITKILPTSNALDATTTTHDVGSHLQGNFTEPSSVPLFIQFMTKLRSSLKSHNNLSLLLVIIIALIFFIQQFSILVLLARPQHVHMNTPVEFMNTMNNGMTRNPSDIAWMEKRIHHLKDEMYMVESRLERMRYEHSVLKKQLKDLEQHK* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00549 526 Coils Coil 505 525 - -
Phac10g00549 526 ProSiteProfiles VASt domain profile. 176 348 IPR031968 -
Phac10g00549 526 PANTHER PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC 1 524 - -
Phac10g00549 526 Gene3D - 1 75 IPR011993 -
Phac10g00549 526 Pfam GRAM domain 1 73 IPR004182 -
Phac10g00549 526 Pfam VAD1 Analog of StAR-related lipid transfer domain 180 327 IPR031968 -
Phac10g00549 526 CDD PH-GRAM_GRAMDC 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00549 Phac-Chr10 6877555 6889511 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00549 - - gmx:100805910 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g00549 10 6877555 6889511 Phac10g00549 10 6877555 6889511 ECH