Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00542 ATGGCCACTGCCAATCCCTTTGATTTGTTGGGCGACGATGCCGAGGACCCGTCGCAGTTGATCGTGACCGAGCAGTTGAAGGCCGCCGCGGCGCCGAAGAAGGAGCAGGGCAAGCCTGGACCCCGCGGGGGTGCGGCGGTGGCTCAGCAGAGCAAGCCGGCGCAGTTGCCTTCCAAGCCAATCCCTCCCACTCAGGCTGCGAGGGAGGCAAAAAATGAAGCTTCTTATGGTGGCCGGGGAGGTGGACGAGGAGGTGGACGAGGATATGGACGAGGACGTGGTGGTGGCTTTGGTCGTGATTTTTCCAATGACGAGAACTCATCTGTCCCTGTAAACCAAGGATCTTTTGAAGGAGAGGCTGGAAATACCTCAGAAAGAAGTGGTTATGGTGCACCACGCGGGCCCTATCGTGGTGGTGGTCGTGGTCGTCGTGGAGGCTTTAGCAATGGTGAAGTTGGTGAAGATGGACGCCCAAGAAGGGCCTTTGAACGCCACAGTGGGACTGGACGAGGAAATGAATTCAAACGGGATGGTGCTGGACGAGGAAACTGGGGTACCCAGTCTGATGATATTGCTCAGGTGACTGAGGAAGTGGGGGATGAAACTGAAAAGAATTTTGGTGATGAGAAGCCTGTAGGTGAGGAAGCTGCAGCAGATGGAAACAAGGACAGTCCTGCTAATGAAAATGAAGAGAAGGAGCCGGAGGAGAAGGAGATGACCCTGGAAGAGTATGAGAAAGTGCTGGAAGAGAGAAGGAAGGCCCTGCAGGCTCTCAAGACTGAAACAAGAAAGGTGGATATCAAGGAGTTTGCATCCATGCAGCCACTGTCAAACAAGAAAGACAATGATGAGATATTTATTAAACTGGGATCTGACAAGGATAAGCGTAAAGATGCTTTGGAGAAGGAGGAGAGATCCAAGAAGTCTGTGAACATCACTGAGTTTCTGAAGCCAGCTGAAGGGGAAAGGTACTACAACACGAGTGGGCGTGGGAGGGGACGCGGTCGCGGCGGTGGCCGAGGAGGAGGAGTCGGAGGAGGATACAGTGGAAATGCAGGGAGCAATGTGACAGCTCCATCAATTGAGGATCCTGGGCAATTCCCAACCTTGGGTGGCAAGTGA 1122 0.5374 MATANPFDLLGDDAEDPSQLIVTEQLKAAAAPKKEQGKPGPRGGAAVAQQSKPAQLPSKPIPPTQAAREAKNEASYGGRGGGRGGGRGYGRGRGGGFGRDFSNDENSSVPVNQGSFEGEAGNTSERSGYGAPRGPYRGGGRGRRGGFSNGEVGEDGRPRRAFERHSGTGRGNEFKRDGAGRGNWGTQSDDIAQVTEEVGDETEKNFGDEKPVGEEAAADGNKDSPANENEEKEPEEKEMTLEEYEKVLEERRKALQALKTETRKVDIKEFASMQPLSNKKDNDEIFIKLGSDKDKRKDALEKEERSKKSVNITEFLKPAEGERYYNTSGRGRGRGRGGGRGGGVGGGYSGNAGSNVTAPSIEDPGQFPTLGGK* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00542 373 MobiDBLite consensus disorder prediction 101 122 - -
Phac10g00542 373 MobiDBLite consensus disorder prediction 29 240 - -
Phac10g00542 373 Gene3D - 156 269 - -
Phac10g00542 373 Pfam Hyaluronan / mRNA binding family 158 265 IPR006861 -
Phac10g00542 373 Pfam Stm1 1 81 IPR019084 -
Phac10g00542 373 MobiDBLite consensus disorder prediction 224 240 - -
Phac10g00542 373 Coils Coil 241 264 - -
Phac10g00542 373 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 372 IPR039764 GO:0003723
Phac10g00542 373 MobiDBLite consensus disorder prediction 197 217 - -
Phac10g00542 373 SMART HABP4_PAI_RBP1_2 158 266 IPR006861 -
Phac10g00542 373 MobiDBLite consensus disorder prediction 281 311 - -
Phac10g00542 373 MobiDBLite consensus disorder prediction 263 373 - -
Phac10g00542 373 MobiDBLite consensus disorder prediction 148 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00542 Phac-Chr10 6754988 6758672 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00542 K13199 - gmx:100805110 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g00542 10 6754988 6758672 Phac10g00542 10 6754988 6758672 ECH