Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00537 ATGTCTCTATTTTCCTTATTCTGTTTGGTGCTTGTTAGCCAATTGATGGCTGGATTCAGTTCATCAATACCACCTCCATCCTATGGAGATCATTTATCTGTTCTCAGCATAGATGGTGGTGGTATCAGGGGGATTATTCCTGCAACTGTTCTTGATTACTTAGACAAGGCTCTTAAGGCAAAGGATCCAACAACATCATTGGCACATTACTTTGATGTGATATCAGGAACAAGTACTGGTGGACTCATGACTGCTATGTTAGCAGCACCAAACTCACCTGATTCCAATGAACCTCTCTTCACTCCATCAGAAGTAGTAAAGTTCTACAAGAAATATGGCCCTGAAATATTTAAAGCTAGACCTTGGTATGATCCTAACAAATGTCCCAAGTATGATGGAGTGTTCTTGAGAAATATAACTCGTCAGATATTGAAAGATACACGACTGAATCAAACGTTGACGAACGTGGTTATACCATCTTTCGATGAGAGGAAAATCAACCCAGTTGTATTCTCAAACTTCAAGCTGAAGACAGAAACTTATCTGAATGCCAAACTCTCAGATATATGCTTAGCCACTTCAGCTGCACCTACTTTTCTGCCACCCCACCAATTTGTGAATGATGGTGTTGAATTTGATATGATTGATGGAGCTATGGCTGCTAATAATCCAGCTATGGTGGCTGTGAGTGAAGTGATACAACACACTGATGAGGAGAAGGAAATCCTGTTGCTGTCATTAGGAACTGGAACAACAAAAAGTAGCAAGTTAAATGGCATTTTTGATGGTGTTTGTCAAATTGGATGGCTAATTAACAGCATTGATGTTGTTAGTGAGGCTTTATACAGTACAAACATGATCCATTACTACCTTGCCACAGTTTTCCCTGGTCTCTTGCCTCAGGATAACTATCTTCGAATTGAGGAGTATAACCTTAATCCATCAGTGGAAGCAATGGATGATGCCTCACCAGAAAACATGGATAAGCTTGAGAAGATAGGAAAGAACTTGTTGAACCAAAATGTTTTCAGGGTAAACATTAATAGTTTTGCCCCAAATCAACTCGACTATACAAATGCTCAAGCTCTTGACAGGTTTGCTGAGAAACTGTATGGTGAGAGGCAGTTGCGTCTGAAGAGGAAATCTATGGCAAACGGAGGAAGACCATTTATTGGAACTGTTAAAGCAAATTCCAACCGAATCTCAGCAACTTAA 1215 0.3992 MSLFSLFCLVLVSQLMAGFSSSIPPPSYGDHLSVLSIDGGGIRGIIPATVLDYLDKALKAKDPTTSLAHYFDVISGTSTGGLMTAMLAAPNSPDSNEPLFTPSEVVKFYKKYGPEIFKARPWYDPNKCPKYDGVFLRNITRQILKDTRLNQTLTNVVIPSFDERKINPVVFSNFKLKTETYLNAKLSDICLATSAAPTFLPPHQFVNDGVEFDMIDGAMAANNPAMVAVSEVIQHTDEEKEILLLSLGTGTTKSSKLNGIFDGVCQIGWLINSIDVVSEALYSTNMIHYYLATVFPGLLPQDNYLRIEEYNLNPSVEAMDDASPENMDKLEKIGKNLLNQNVFRVNINSFAPNQLDYTNAQALDRFAEKLYGERQLRLKRKSMANGGRPFIGTVKANSNRISAT* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00537 404 Gene3D Cytosolic phospholipase A2 catalytic domain 26 383 - -
Phac10g00537 404 Pfam Patatin-like phospholipase 35 228 IPR002641 GO:0006629
Phac10g00537 404 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 35 229 IPR002641 GO:0006629
Phac10g00537 404 FunFam Patatin 25 383 - -
Phac10g00537 404 SUPERFAMILY FabD/lysophospholipase-like 33 357 IPR016035 -
Phac10g00537 404 PANTHER XYLOSE ISOMERASE 18 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00537 Phac-Chr10 6676907 6680568 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00537 21 384 Miscellaneous Gene Families AT2G26560 40.704 4.94e-84 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00537 - - gmx:100802647 592.038