Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00533 ATGGCTGCTTTTGTTTTGCTTTTTCTAGTGTTTTCTTCTCAGTTGATTGGTGGAATGAATGCACAGCTTCCATCTTCAGCCTATGAAAACATCATAACCATTCTCAGCATAGATGGAGGTGGTATTAGGGGTCTGGTTCCTGCAGTAGTTCTTCAGCACTTGGAAAAGTCTCTTCAGGCATGGGATAAAAGTGCAACACTGGCAAAGTATTTTGATGTGATAGCAGGGACTAGCACAGGAGGACTCATGACTGCTATGCTAACTACTCCTCACCCAGATGACCCCACTCGTCCTCTCTCCACTGCCACTGAACTCATCAATTTCTATAAAACATATGGCCCTTCTATATTCAATGAAACTAGGGGTTGGAATAATGCATTCCCAGGTCCTAAGTATGATGGCAAGTTCTTGCATTCCATAGCACGTGACTTATTGCGAAATACAAGAGTCAGCCAAACACTCACAAATGTTGTGATTCCAACCTTTGATGTTAAGAAGCTTCACCCTGTTATATTCTCAAACTTTCAGCTTAAGGAAGTTCCTAGCTTTGATGCGAAACTGTCAGATGTATGCATTGGAACTTCAGCTGCACCAACCTATCTACCACCATATTACTTCCAAAATGATGGCACTGAGTTCAATTTGATTGATGGTGGAGTTGCAGCAACTAATCCGGCTATGGCTGCTGTGACAGAAGTGATAAAGCAACAGAGGGAGAAGAATCCTGAAATGACTCCAAAGAATTCAAATGAAAATTCCAAAATTCTGTTGCTGTCTGTAGGATGTGGAACTGCAAAAGCTGTTGGGTATGATGCTCAAGTTGCAGAACAGTTCTCAGCAGCTGTTTGGGCAGGATCAGGGCTTGCAACTGGTGCTTATGATTATGCTTCCAAAGATATGACTGAGTTTTACATTTCCACTGTCTTCCCTGGCCTCCAATCTTCAGACTACTACCTTCGAATTCAGGATTATAACTTGGATCCATCCATGGATGCCCTTGACAATGCCACTGCTGTGAACATGGAAAATCTTGAAAAGGTTGGGCAGAAGCTGCTGAAAGAACCAGTTTTGAAGATGAATGTGGCTACTTTTGTCCCAGAGGAAGAAGTAGAATGGGGTACAAATGCTAAGGCTCTTGAAAGGCTGGCTGAAGTTCTGTACAGAGAGAAAAAGCTTCGTTCTATGAGAAAGAAATCGATGGAAAAAATGGGACGACCATTTATTCAAAATATTGTTGGGAAATTCAAACAAGTTATTAATAATGCATGA 1269 0.4177 MAAFVLLFLVFSSQLIGGMNAQLPSSAYENIITILSIDGGGIRGLVPAVVLQHLEKSLQAWDKSATLAKYFDVIAGTSTGGLMTAMLTTPHPDDPTRPLSTATELINFYKTYGPSIFNETRGWNNAFPGPKYDGKFLHSIARDLLRNTRVSQTLTNVVIPTFDVKKLHPVIFSNFQLKEVPSFDAKLSDVCIGTSAAPTYLPPYYFQNDGTEFNLIDGGVAATNPAMAAVTEVIKQQREKNPEMTPKNSNENSKILLLSVGCGTAKAVGYDAQVAEQFSAAVWAGSGLATGAYDYASKDMTEFYISTVFPGLQSSDYYLRIQDYNLDPSMDALDNATAVNMENLEKVGQKLLKEPVLKMNVATFVPEEEVEWGTNAKALERLAEVLYREKKLRSMRKKSMEKMGRPFIQNIVGKFKQVINNA* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00533 422 Pfam Patatin-like phospholipase 35 229 IPR002641 GO:0006629
Phac10g00533 422 Gene3D Cytosolic phospholipase A2 catalytic domain 22 399 - -
Phac10g00533 422 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 35 230 IPR002641 GO:0006629
Phac10g00533 422 PANTHER XYLOSE ISOMERASE 23 394 - -
Phac10g00533 422 FunFam Patatin 25 400 - -
Phac10g00533 422 SUPERFAMILY FabD/lysophospholipase-like 31 364 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00533 Phac-Chr10 6589888 6594873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00533 28 396 Miscellaneous Gene Families AT2G26560 45.547 2.37e-102 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00533 - - gmx:100802114 678.322