Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00476 ATGGCATCATCGGATGAAGAGGGTGAAATTATCCCAGATCTTGTTAATAGTTATTGGTTTGAAAATGCAAAGGAGGATTTTGTGTCACTTTCTAGTTTGACACTGTTGTTTAGCATCAGTGAGATCGAATGTGACTTGGGAGAAAAAGTATTTTTGCGTGGCACCACTGATGATGGCCTGCAGAAAATTTACAAACAGATCATAGGATGGAGATTTGAACTTCCCTATGAACAGCCTGAGATTTCGGTGCTTTCAAAGGACAAAAATTGGATTACACTCCAAAGACCAAGGAAGTGTTTTGAAAGTATACTTAGGACAATCTTGGTCACTATATATTGTTTACATTTTCTGAGATGGAATCCAGAGGAATCTCATATATCTATTTGGGGCAAAATGAAGAAGGCCTTTAGCACATTTGATATCATACCATCCGAGAATGATATTCTGTGTCATCTGAGTTTGATCAGAGAAGCGGTTAAAAGGGACAAAAATTTAACAAAATCAAAGGATGTTAATCCTACAAGGAAACCAAAATTTATTGTGGACTCAAAGGATGAGGAGAAAGTCCAACCTAATGGCAAACTCAATCCAGATGGAGAGCAAAATATTGGATATGATACTGTTTGTTCAATATGTGATAATGGTGGAGAAATACTTCCTTGTGAAGGAAGCTGTTTGAGATCCTTCCATGCAACCAAAGAAGCTGGTATAGACGCATTTTGTGAATCCCTTGGCTACACCAGTGCTCAAGTTAAGGCCTTTCCAAACTTTTACTGTCAAAATTGTAAGTACAAGCAGCACCAGTGCTTTGCATGTGGCAAATTGGGTTCATCTGATGTATCATCTACAGCAGAGGTATTTCCTTGTGTTACTGCAAATTGTGGTCACTACTACCATCCTGACTGTGTAGCAAGGCTTCTCTCCCCTGGCACTGACACTGAACAAGAGGAAATGAGAAAGAAAGTTGCCTTTGGCCAAGCATTTGTGTGTCCTCTTCATACATGTTCTTTATGCAAAAGGGGAGAAGTTAAAAATGTTCATCATTTGCAGTTAGCAATATGTAGACGTTGTCCTAAAGCTTACCACAGAAAATGTTTACCCAAGGAAATTTCCTTCACACTTGATTATGATAAGGGCATTGAGCAGAGGGCTTGGGATGGTTTACTTGATCATCGAATTTTGATATATTGCATGAACTTGGAATTAGAAGTAGAAATAAGGAAAACCAACCTTTTGCTAGCCTGGCACAAGGATCATGAGATAGATAGCAAACTCTGGACTCCTGCAAGAGACCATCTGCTATTTCCTGATATGAAAGTCAAAAGGAAGGTATTCAATTACAAATTATTTGACAAAGGAAAAGATACTATAAATTTGGGTAAAAGTTTTGAAGATCTTCCTCCTAAGGAAACATCGATACCAAACTGGGTTGCAGAGCAAAGTGTTAGCATTAAAGATGGCGATGTTGCCAAAGATCTGGAGAAAATATGTTGTAAGAAAGATATACGTTTCTCTAGTGCATTAGTCAAGTTTGATAGGGATAGAAAATATTTGAAGAAAAAAATGGTCAGTGGAAGAATTGACAAAACTGGCTTTGGGAAGCCTCTAGTAAAAAAAATCCAAACATCGCTTGACTTTGATAATGCTGAAATGAAAAACAGTATCTTGTCTTTAATGAAAGAATCCATGTCTACGTTTAATGAGCAAGAATTCATTAAGAACCATCAAGCCTTCTCTACAACACCAGGTTTAACCGAAACTGAATTTCATAAGAACCTTACTCAAGGGAAAGTAGAAAGTTCAATTAAGGCTATTCAAACAGCTTTGCAGAGGTTAGAAGAAGGATGTAGTATTGAAGAAGCAAAAGCTATTTGTGATCCAGGGGTCCTCCATCATCTTTTCATTTGGCAGAAGCAGCTCAAGGTGTATCTTGCACCTTTTCTCCATGGCATGCGATATACTTCCTTTGGTCGCCATTTCACTAAAATAGACAAACTGAAGGAGGTTGTTAATAGGCTTCATTGGTATGTTCAGAATGGAGACACGGTTTTGGACTTCTGTTGTGGTTCTAATGACTTCAGTTGTCTAATGAAATCAAAGCTTGAACAGATGGGGAAGTCATGTTCATTCAAGAACTATGATTTATTCCAACCTAAGAATGATTTCAACTTTGAGAAGAGAGATTGGATGAGTGTCAATGCAGAAGAATTACCACACGGTTCTAAACTTATCATAGGGCTGAATCCTCCTTTTGGGGTGAACGGGTGTCTTGCTAACAAATTTATTAACAAGGCATTGACTTTCAATCCAAAACTTCTTATACTAATTGTACCAAAAGTGACTAAACGACTTGACAAAAAGAAAGGTGGATATGATTTAATTTGGGAGAATGATGAAATGTTTTCAGGAAAGTCATTTTATCTACCTGGTTCTGTTGACGTGCGTGACAAGCAATTGGAAGACTGGAACTTGAAGCCACCACCTTTGTACCTTTGGAGTCACCCTGATTGGACCACTAAGCACAGAAAAATTGCTCAAAAACATTGCCACATCAATGAAAAATATGATGTGCATGTGAAGAATTATCTTATGGAGGAGAATCATGACTGTTACCAGGACTACACTGGCTTGCATGCACCTGGTGATGTTTTGAGCATATTTGATGATATTCCATGTGATAATGATGATGGTGCAGATGAGGAAGTTGCAACCAGCAATGCTCTGGGAGAGGTGAAGGGAACAGTGTTTTCTGATTGTGGAGGAGAAATGGAAATGGAGTTACCCTTTGATGAAGCTGAGGAAATGTGTATTGATATGGAGTTATCAACTCCCTAG 2835 0.3824 MASSDEEGEIIPDLVNSYWFENAKEDFVSLSSLTLLFSISEIECDLGEKVFLRGTTDDGLQKIYKQIIGWRFELPYEQPEISVLSKDKNWITLQRPRKCFESILRTILVTIYCLHFLRWNPEESHISIWGKMKKAFSTFDIIPSENDILCHLSLIREAVKRDKNLTKSKDVNPTRKPKFIVDSKDEEKVQPNGKLNPDGEQNIGYDTVCSICDNGGEILPCEGSCLRSFHATKEAGIDAFCESLGYTSAQVKAFPNFYCQNCKYKQHQCFACGKLGSSDVSSTAEVFPCVTANCGHYYHPDCVARLLSPGTDTEQEEMRKKVAFGQAFVCPLHTCSLCKRGEVKNVHHLQLAICRRCPKAYHRKCLPKEISFTLDYDKGIEQRAWDGLLDHRILIYCMNLELEVEIRKTNLLLAWHKDHEIDSKLWTPARDHLLFPDMKVKRKVFNYKLFDKGKDTINLGKSFEDLPPKETSIPNWVAEQSVSIKDGDVAKDLEKICCKKDIRFSSALVKFDRDRKYLKKKMVSGRIDKTGFGKPLVKKIQTSLDFDNAEMKNSILSLMKESMSTFNEQEFIKNHQAFSTTPGLTETEFHKNLTQGKVESSIKAIQTALQRLEEGCSIEEAKAICDPGVLHHLFIWQKQLKVYLAPFLHGMRYTSFGRHFTKIDKLKEVVNRLHWYVQNGDTVLDFCCGSNDFSCLMKSKLEQMGKSCSFKNYDLFQPKNDFNFEKRDWMSVNAEELPHGSKLIIGLNPPFGVNGCLANKFINKALTFNPKLLILIVPKVTKRLDKKKGGYDLIWENDEMFSGKSFYLPGSVDVRDKQLEDWNLKPPPLYLWSHPDWTTKHRKIAQKHCHINEKYDVHVKNYLMEENHDCYQDYTGLHAPGDVLSIFDDIPCDNDDGADEEVATSNALGEVKGTVFSDCGGEMEMELPFDEAEEMCIDMELSTP* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00476 944 CDD PHD2_NSD 268 333 - -
Phac10g00476 944 SMART PHD_3 208 263 IPR001965 -
Phac10g00476 944 SMART PHD_3 335 401 IPR001965 -
Phac10g00476 944 SMART PHD_3 268 334 IPR001965 -
Phac10g00476 944 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 266 356 IPR013083 -
Phac10g00476 944 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 651 798 IPR029063 -
Phac10g00476 944 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 205 265 IPR013083 -
Phac10g00476 944 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 5 863 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00476 Phac-Chr10 6003712 6014530 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00476 - - cam:101512524 1246.49