Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00426 ATGTGTAACTGTAAGATGCAGCACAATAAACATAGCATACAGTTGAGTGATCAAGGTGTAGTGCTGAATGTCCTTGCTTGTGTGTACACAGGTAAGGAGTGGAGGAAAAAGCAAATTAGAAAGATAACAGACCAAGTTTTTGACCAACTCAAGAATGAAGAGCAATCTGATAACTTGAGTTTTCGAGATATCTATATTGCTACTTTACTTGTGTACAATGGTATCAACAAGTATATTCCTGGTCCCCATTGTGATCCTCCTTCAAAAGACAGAGTCAAACAATTCATTAAGAAATGTGATCACAACAAGGATGATCAAATTGATCGTGATGAATTTTTCGGTTTCATTCGGCAAATGGCACCTGAAACATTCAATGTTGTTCGTAGAAAACTTGTAGCCACTTTGGTTGTTGCACCAACAGTTGCAGCAACAACAAAAAAAACTACTGAACATGTACCAGGTGTTGGGAAACTGGTGCAAAGGTTACCCAAAGCACTTTATGCTGCCCTTTTGACAATTGCAGCTCTGTGGTTCCAAGAGAACAATCAGGATTCTTAG 558 0.3871 MCNCKMQHNKHSIQLSDQGVVLNVLACVYTGKEWRKKQIRKITDQVFDQLKNEEQSDNLSFRDIYIATLLVYNGINKYIPGPHCDPPSKDRVKQFIKKCDHNKDDQIDRDEFFGFIRQMAPETFNVVRRKLVATLVVAPTVAATTKKTTEHVPGVGKLVQRLPKALYAALLTIAALWFQENNQDS* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00426 185 Gene3D - 21 129 - -
Phac10g00426 185 ProSiteProfiles EF-hand calcium-binding domain profile. 87 122 IPR002048 GO:0005509
Phac10g00426 185 ProSitePatterns EF-hand calcium-binding domain. 100 112 IPR018247 -
Phac10g00426 185 PANTHER CALCIUM ION-BINDING PROTEIN 34 180 - -
Phac10g00426 185 SUPERFAMILY EF-hand 76 121 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00426 Phac-Chr10 5375749 5379022 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00426 31 185 EF-hand Containing Proteins AT1G64850 56.129 9.24e-62 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00426 - - vun:114167513 244.973