Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00390 ATGGAAGACTCGGATTCAGTTGCTACGCTGATAGATTCTACAACTTCGAAGATACAACAGCTGCAAAAGGCATTTGCTGAACTTGAAAGTTACCGTGCTGTTACTCTGAACTTGAAATGGAAAGATCTAGAGGAACATTTTCATGGTCTTGAGAAAACCTTGAAGAGGCGATTTCATGAATTGGAAGACCAGGAAAAAGAGTTTGAGAACAAAACGAGGAAGGCTCGGGAAATACTGGAAAAGCGGCAAGCAGCTGTTTATGCTAAGGAGCAAGACACGTTGCAGAGGCTTCAGGAGAAGCGAGATGCAGCTGTATTTGATATTATGAATGCTCGAGAAAAGCACAGGAAGGTTTCCCCAAGCGATTTGGCTATTGTCTCTAATAGGGGTAATGGGGCACTGTGTGGGGAGGAGAAACCAGTAGATGCTGTGTCTTTTGGGGCTCAAGGTAAAGTGGAAGAGCTGGAACTTTCTCCTAAAATTGAAAATGTGGAGTTGTCTTATCCAGACTTGGTAAAACTATGTAAAGAGATGGATGCTACCGGACTTCACAAATTCATATCTGATAATCGTAAGAACCTTGCTGCTGTAAGGGAGGAAATACCATATGCATTAAGAGCTGCTCCTAACGCTGCCTGTTTAGTTTTAGATTCTCTGGAAGGATTTTACTGTACAGAAGTGTCAAATCAGGATGTAAAGAAGGATGCTAACTTATTGGGCCTTCGTCGAACATGTATCATGCTGATGGAATGTCTGTGTGATTTCCTGAGCAACTCAGATTGTGTTTCTAATGTCATTTCAGAGGATATTAAAGGCAGGGCAAAGGCAGTTGCTGAGGAATGGAAACCCAGATTGGATGCTCTTGACATGGATGCTAGCAATGGGAATTCCTTGGAAGCTCATGCGTTTTTGCAACTTCTAGCAAGTTTTGGTATTGCATCTGGTTTTAATGAGGAGGAGTTATCTAGGCTAATTCCAATGGTATCTCGACGTCGCCAAAGTGCTGATTTGTGCCGTTACCTTGGATTGTCAGAGAAGATGCCTGGTGTCATCGAAGTTTTGGTGAATAGCGGGCGGCAAATTGATGCTGTTAACTTGGCTTTTGCATTTGATCTTACAGAACAATTTTCACCCATTGCTTTACTGAAGTCTTACTTGAAGGATGCTAGGAAAACTTCTTCTCCTGTCAAAAGTGTTAACTCATCTCCCACTGCACAGATTGATGTTAATGAGCGAGAGCTGATTGCACTTAAGGCTGTAATTAAGTGCATTGAGGATCATAAACTCGATGAGCAGTATCCTCTGGATCCTCTCCAGAAACGAGTGAGCCAACTGGAGAAGGCGAAGGCTGACAAGAAAAGGGTAACTGAAGCAACAAAACCTCAACCCAAGAGACCCCGTGCTAACAGTGCTGGATATGGTCCACGTGTCACTAACTTTCCATCTGACAAAACTTGCTATGCTAGAGTTGCTGACAGGTATCCTCAATATGTGTATGACCGATCTTACATGTACCCTGGACCAACTGACAGTCACTGCCCCCCTCTCATGGCTTCTGCAACTTATAACTTCTCTCTTAATCCTGCCAACTACTTTGGGAATGCTTATCAGTACCAACCTACATATCTCCACTAG 1635 0.4324 MEDSDSVATLIDSTTSKIQQLQKAFAELESYRAVTLNLKWKDLEEHFHGLEKTLKRRFHELEDQEKEFENKTRKAREILEKRQAAVYAKEQDTLQRLQEKRDAAVFDIMNAREKHRKVSPSDLAIVSNRGNGALCGEEKPVDAVSFGAQGKVEELELSPKIENVELSYPDLVKLCKEMDATGLHKFISDNRKNLAAVREEIPYALRAAPNAACLVLDSLEGFYCTEVSNQDVKKDANLLGLRRTCIMLMECLCDFLSNSDCVSNVISEDIKGRAKAVAEEWKPRLDALDMDASNGNSLEAHAFLQLLASFGIASGFNEEELSRLIPMVSRRRQSADLCRYLGLSEKMPGVIEVLVNSGRQIDAVNLAFAFDLTEQFSPIALLKSYLKDARKTSSPVKSVNSSPTAQIDVNERELIALKAVIKCIEDHKLDEQYPLDPLQKRVSQLEKAKADKKRVTEATKPQPKRPRANSAGYGPRVTNFPSDKTCYARVADRYPQYVYDRSYMYPGPTDSHCPPLMASATYNFSLNPANYFGNAYQYQPTYLH* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00390 544 Coils Coil 51 81 - -
Phac10g00390 544 Coils Coil 94 114 - -
Phac10g00390 544 MobiDBLite consensus disorder prediction 444 475 - -
Phac10g00390 544 MobiDBLite consensus disorder prediction 444 461 - -
Phac10g00390 544 Pfam Frigida-like protein 168 456 IPR012474 -
Phac10g00390 544 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 15 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00390 Phac-Chr10 5054739 5059975 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00390 - - gmx:100806993 967.992