Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00377 ATGAAGGGTGGAGCCAAGAAAAAGGCCACCGCGGATGTTCCCACCGAGGTGGTTGAGCCTTCTGGGGCTGCGGATTCGGGAGGGGGAGAAGGTGGGAGTGGGCAAGTTGAAAGCTTTGAGGGGAACGAGGGTACCCAGTTGCGGAACGGTGAGGATGAGGAACCTCAGGTGGAGGATTCTGAAGGGGAGGGCGAGGAAGGAGAAGGGGAAGGGGAAGAGGAGTATGGGGTGGAGGGAGATGAAGAAGAGGAAAATGTTGGTGGTACTTTTCCAGGGGCTCAAGGTGTTATTCTTGCTGAGAATTTTTATGAAGTTGAAGCTATACGTCGTAAGAGGGTGCGGAAGGGTCAGGTGCAATACTTTATCAAATGGAATGGATGGCCTGAGACAGCCAACACTTGGGAGCCACCAGAAAATCTAGTTTCTGTTCCTGATGTTGTTGAAGCTTTTGAGGAGAGCTTGAAGTCAGGAAGACATCGTAAGCGCAAACGCAAGCATGTGGTTCATCATACTCAACCCAGGAAGCGGCTGGAGCGTTCTACCACTCCATACAGCCTTCGACGCTTTTCGACTAGTACGGCTGGAAACCATACACAGTCTGCTCTGCCTGTTCTTAGTGATGCAAGCCTTCCTGTTATTCCCGCCTTTCCTCAGACTGTTCTTTTTGCTGACGAATTGGGAAATGTTGCTGGCAGCAATCTTGAAAATGCCACACCTGTTAATGTTACCAAGTCTGCAATTGGTTCAGAACAAAATATTGAAAGGAATGAGGAAAATGATTATGATCCTAAGCTAAGTGAGCTTAAAGCTTCTTCTGCCTGTGGGAATGAAGCAGACAGGCTTGCAATACGAATTCCAGAAGCAATTCCTTCTGGTCCTGGGTTTGCTGGCAATAATGGTCAAACAGTTGCTAAATCAAAGGGGGTTCACATGGAAATAAGTGAAAGTGGCCGCTGTCGGGGAGCCAAAAGGAGAAAATCTGGTTCTGTAAGGAGGTTCAACAAAGAATTATATGCTGGTGAGCCTGCCAGTACACAAAATCCAGTTGGAGTAGCTGTTAGTACAACTGAGTCAGCACTACTAACAAGGAATGCTGGTACTGGTACTAATCATGCCAGACCTGCTAGCAATATCGTAAAGATTATAAAGCCAATAGGCTATTCAGCTACCGTATCCAGTGGAATGCAGGATGTTTTGGTAACCTTCGTGGCTTCAAATGATCAACATTGCAGGTCTGATGGAACAGAAGTGATGGTTAACAACAAGTATCTAAAAGCATTTAATCCACTTCTTCTCATCAATTTCTATGAGCAGCATCTTCGCTACAGCCCTACATCTTGA 1341 0.4668 MKGGAKKKATADVPTEVVEPSGAADSGGGEGGSGQVESFEGNEGTQLRNGEDEEPQVEDSEGEGEEGEGEGEEEYGVEGDEEEENVGGTFPGAQGVILAENFYEVEAIRRKRVRKGQVQYFIKWNGWPETANTWEPPENLVSVPDVVEAFEESLKSGRHRKRKRKHVVHHTQPRKRLERSTTPYSLRRFSTSTAGNHTQSALPVLSDASLPVIPAFPQTVLFADELGNVAGSNLENATPVNVTKSAIGSEQNIERNEENDYDPKLSELKASSACGNEADRLAIRIPEAIPSGPGFAGNNGQTVAKSKGVHMEISESGRCRGAKRRKSGSVRRFNKELYAGEPASTQNPVGVAVSTTESALLTRNAGTGTNHARPASNIVKIIKPIGYSATVSSGMQDVLVTFVASNDQHCRSDGTEVMVNNKYLKAFNPLLLINFYEQHLRYSPTS* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00377 446 SMART chromo_7 102 155 IPR000953 -
Phac10g00377 446 Gene3D - 97 158 - -
Phac10g00377 446 ProSiteProfiles Chromo and chromo shadow domain profile. 103 162 IPR000953 -
Phac10g00377 446 SMART ChS_2 367 445 IPR008251 GO:0005634
Phac10g00377 446 PRINTS Chromodomain signature 100 108 IPR017984 -
Phac10g00377 446 PRINTS Chromodomain signature 113 127 IPR017984 -
Phac10g00377 446 PRINTS Chromodomain signature 128 140 IPR017984 -
Phac10g00377 446 MobiDBLite consensus disorder prediction 54 85 - -
Phac10g00377 446 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 1 445 IPR044251 GO:0006325|GO:0031507
Phac10g00377 446 MobiDBLite consensus disorder prediction 158 173 - -
Phac10g00377 446 SUPERFAMILY Chromo domain-like 95 158 IPR016197 -
Phac10g00377 446 Pfam Chromo (CHRromatin Organisation MOdifier) domain 103 152 IPR023780 -
Phac10g00377 446 CDD CD_CSD 103 152 - -
Phac10g00377 446 MobiDBLite consensus disorder prediction 1 92 - -
Phac10g00377 446 ProSitePatterns Chromo domain signature. 120 140 IPR023779 -
Phac10g00377 446 MobiDBLite consensus disorder prediction 158 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00377 Phac-Chr10 4913107 4923922 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00377 - - gmx:100782342 526.168