Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00344 ATGGTGGCTCAGCTTGAACACCAATTTCGGCTTGGGAGACTTTCCCTTCAAGGATTGTGGTTTTATTGTCAGCCCATGATGAGGTCAATGCAGGCATTATCCACTGTCATACAGAAGGCTTCAGTCAGCAACATTTGTGGGTCTGCTGTTCTTAACTTACTTCAGAGCCAGGCAAAGGCTATGGCTGGGGACAATGCTGTGCGGTTGATGCTGGAGAAAATGACACAATGTGCAAGTAGTGCTTACATGAGCATATTAGAAAGATGGGTTTATGAAGGTGTAATAGATGATCCTTATGGTGAATTTTTCATCGCAGAGGACAAATCTCTTCAGAAGGAGAGTCTCACCCAGGATTATGAAGCTAAGTATTGGCGACAACGTTATAGCCTTAAAGATGGAATTCCTAGTTTCCTTGCAAATATTGCAGGGACAATTTTGACGACAGGAAAATATTTAAATGTCATGAGAGAATGTGGACACAATGTTCAGGTCCCTCCATCAGAAAATTCAAAACTTATGAGTTTTGGATCAAATCATCATTATCTTGAATGTATTAAGGCTGCTTATAACTTTGCAAGCAGTGAACTCTTGAATCTCATTAAGGAAAAGTATGATCTAACAGGAAGGCTGAAGTCAATTAAACACTATCTTCTTCTTGATCAGGGTGATTTCTTAGTACATTTTATGGATATTGCACGGGATGAACTAGCAAAAAAGCCTGATGAAGTCTCAGTTGAGAAGCTGCAGTCACTTCTAGACCTTGCATTGCGTACTACAGCAGCTGCAGCAGATCCTTTTCACGAAGGCTTAACCTGTGTTGTGGAAAAATCTTCTTTGCTTAGAAGGTTGGGAACATTTAATGATCTTGAAGTGAGTCAGAGAAGTTCTAGTGATAATGATTTGGAGGAAACTGTTAGCATCACTGGACTTGAAACATTTGCACTAAGTTACAAGGTGCACTGGCCACTGTCTATAGTATTATCACGTAAAGCCCTCACAAAGTACCAATTGATTTTTCGTTTCCTTTTCCACTGTAAACATGTTGACCGTCAGTTGTGTGGAGCGTGGCAAGTACATCAAGGAGTTCGTGCTCTCAATACACGTGGAACGGCTATCTCCAGATCATCTCTTCTTTGCCGTAGTATGCTTAAATTTATTAATAGCCTTCTGCACTATCTGACATTTGAGGTTGTTGAACCAAATTGGCATGTGATGTATAACAGACTTCAGTCAGCAAATAGCATAGATGAGGTTATACAACATCACGATTTTTTCCTTGATAAATGTTTGAGAGAATGTTTACTTCTTTTACCTGAGCTGCTGAAGAAGGTGGAGAGGCTTAAATCCATGTGCCTACAATATTCAGCAGCAACCCAGTGGCTTATATCGTCATCTTGTATTGATTTAGGTAAATCAGAGGAATCTATTGATTCAGTTGGCTTGAATAAAGCCAAAAGGAAGTCAGGTCAGGTCTTGAAGTCAACCACCAGAAATGTGGCAGTCACTGATTCTGTTCTCAAATTTGAGAAAGAGTTTAACACCGAGCTTCAGAGTCTTGGATCAATCTTGAGCAATAACTCCCAGGCAGAACCATATCTGGCTCATCTTGCACAATGGATTCTTGGTGTTAAAAATGAACAAAATGGTTTATGA 1653 0.4005 MVAQLEHQFRLGRLSLQGLWFYCQPMMRSMQALSTVIQKASVSNICGSAVLNLLQSQAKAMAGDNAVRLMLEKMTQCASSAYMSILERWVYEGVIDDPYGEFFIAEDKSLQKESLTQDYEAKYWRQRYSLKDGIPSFLANIAGTILTTGKYLNVMRECGHNVQVPPSENSKLMSFGSNHHYLECIKAAYNFASSELLNLIKEKYDLTGRLKSIKHYLLLDQGDFLVHFMDIARDELAKKPDEVSVEKLQSLLDLALRTTAAAADPFHEGLTCVVEKSSLLRRLGTFNDLEVSQRSSSDNDLEETVSITGLETFALSYKVHWPLSIVLSRKALTKYQLIFRFLFHCKHVDRQLCGAWQVHQGVRALNTRGTAISRSSLLCRSMLKFINSLLHYLTFEVVEPNWHVMYNRLQSANSIDEVIQHHDFFLDKCLRECLLLLPELLKKVERLKSMCLQYSAATQWLISSSCIDLGKSEESIDSVGLNKAKRKSGQVLKSTTRNVAVTDSVLKFEKEFNTELQSLGSILSNNSQAEPYLAHLAQWILGVKNEQNGL* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00344 550 Pfam Gamma tubulin complex component N-terminal 1 203 IPR041470 -
Phac10g00344 550 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 1 533 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Phac10g00344 550 Pfam Gamma tubulin complex component C-terminal 206 537 IPR040457 GO:0043015
Phac10g00344 550 Gene3D - 206 541 IPR042241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00344 Phac-Chr10 4602124 4612845 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00344 K16569 - gmx:100795585 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g00344 10 4602124 4612845 Phac10g00344 10 4602124 4612845 ECH
Phac8g00977 8 6601954 6602866 Phac10g00344 10 4602124 4612845 PCT