Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00190 ATGGACGACGATTTCGACATGCCGCCGGCGGATTCCATGAACGACGACTTCAACTTCGGCGGCGACGGCGGCGACCTCGAAGCTCCCGTCCTCAAGGTTGGCGAGGAGAAGGAAATTGGGCAACAGGGCTTGAAGAAGAAACTCCTAAAGGAAGGTGAAGGATGGAATACTCCTGAAGTTGGTGATGAGGTTCAAGTTCACTACACTGGGACGTTGCTTGATGGTACTAAGTTTGATTCCAGCAGAGATAGGGGAACTCCTTTCAGTTTCACGCTTGGACAAGGGCAAGTTATTAAAGGATGGGATCAAGGTATTGTAACGATGAAGAAAGGTGAAAATGCCCTTTTTACCATCCCAGCCGAGCTAGCATACGGTGAATCTGGTTCTCCTCCAACTATTCCCCCCAATGCAACTCTTCAATTTGACGTGGAGCTATTGTCTTGGACTAGTGTGAAGGACATATGTAAAGATGGAGGTTTATTTAAGAAGATAGTTACTGAGGGGGAAAAATGGGAGAATCCCAAGGATCTTGATGAAGTTTTAGTGAATTACGAAGCACGTCTTGAAGATGGGACTCTAGTAGCAAAATCTGATGGAGTGGAGTTCACAGTCGAAGATGGTTATTTTTGTCCTGCTTTGTCAAAGGCTGTTAAAACCATGAAGAAGGGAGAGAAAGTGATTTTGAGTGTGAAGCCTCAATATGGATTTGGTGAAAAGGGTAAGCCAGCACATGGTGACGAAGGTGCAGTTCCACCAAATGCATCATTGGAGATTACCCTTGAGTTAGTTTCTTGGAAGACTGTGTCAGATGTAACTGATGACAAGAAGGTCATTAAGAAGATCCTCAAGGAAGGGGAAGGGTATGAGCGTCCAAATGAGGGGGCAGTTGTGAAATTGAAAGTAATTGGTAAGTTGCAAGATGGTACTTTGTTTTTGAAGAAGGGTCATGATGATGAAGGGGAGCTGTTTGAATTCAAAACTGATGAGGAACAAGTAATTGATGGGCTTGACAGAGCTGTTTTGACTATGAAGAAGGGTGAGGTGGCTTTGTTAACTATTGCGCCTGAGTATGGTTTTGGCTCATCAGAGTCTCAACAGGATCTTGCCGAGGTTCCTTCTAACTCCACTTTGTATTACAAGGTTGAGCTAGTATCGTTTGAGAAGGAAAAGGAGTCATGGGACATGAACACACCGGAGAAGATTGAGGGTGCTGGTAAGAAGAAAGAAGAAGGAAATGCTTTATTTAAAGCTGGTAAATATGCAAAAGCTTCTAAAAGATATGAAAAGGCTGTAAAGTTCATAGAGTACGATACCTCCTTCAGTGAAGAGGAGAAGAAGAGCTCCAAGACCTTGAAGGTTGCCTGTAATCTAAATAATGCTGCATGCAAGTTGAAGCTAAAAGATTACAAACAAGCAGAGAAATTGTGCACAAAGGTACTGGAACTTGAGAGCACTAACGTAAAGGCTCTATATAGAAGGGCCCAGGCATACATCCAGTTGGCTGATTTAGATTTGGCTGAAATCGATATTAAGAAAGCGCTTGAGCTCGACCCTGACAACAGGGAAGTCAAGCTTGAGTACAAGACCTTGAAGGAAAAGATGAAGGAATACAACAAAAAACAGGCAAAATTTTATGGAAATATGTTCAACAAACTGCATAAGCTAGATTCTTTGGACAATAACGTGAGTATTCCTTGTCTCTAG 1704 0.4296 MDDDFDMPPADSMNDDFNFGGDGGDLEAPVLKVGEEKEIGQQGLKKKLLKEGEGWNTPEVGDEVQVHYTGTLLDGTKFDSSRDRGTPFSFTLGQGQVIKGWDQGIVTMKKGENALFTIPAELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGLFKKIVTEGEKWENPKDLDEVLVNYEARLEDGTLVAKSDGVEFTVEDGYFCPALSKAVKTMKKGEKVILSVKPQYGFGEKGKPAHGDEGAVPPNASLEITLELVSWKTVSDVTDDKKVIKKILKEGEGYERPNEGAVVKLKVIGKLQDGTLFLKKGHDDEGELFEFKTDEEQVIDGLDRAVLTMKKGEVALLTIAPEYGFGSSESQQDLAEVPSNSTLYYKVELVSFEKEKESWDMNTPEKIEGAGKKKEEGNALFKAGKYAKASKRYEKAVKFIEYDTSFSEEEKKSSKTLKVACNLNNAACKLKLKDYKQAEKLCTKVLELESTNVKALYRRAQAYIQLADLDLAEIDIKKALELDPDNREVKLEYKTLKEKMKEYNKKQAKFYGNMFNKLHKLDSLDNNVSIPCL* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00190 567 FunFam Peptidylprolyl isomerase 153 266 - -
Phac10g00190 567 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 177 266 IPR001179 GO:0003755
Phac10g00190 567 SUPERFAMILY FKBP-like 153 269 - -
Phac10g00190 567 Gene3D - 33 151 IPR046357 GO:0003755
Phac10g00190 567 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 294 387 IPR001179 GO:0003755
Phac10g00190 567 Pfam Tetratricopeptide repeat 487 520 IPR001440 GO:0005515
Phac10g00190 567 SUPERFAMILY FKBP-like 36 154 - -
Phac10g00190 567 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 56 146 IPR001179 GO:0003755
Phac10g00190 567 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 172 263 IPR001179 GO:0003755
Phac10g00190 567 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 288 384 IPR001179 GO:0003755
Phac10g00190 567 Gene3D - 152 266 IPR046357 GO:0003755
Phac10g00190 567 SUPERFAMILY FKBP-like 269 405 - -
Phac10g00190 567 SUPERFAMILY TPR-like 396 551 IPR011990 GO:0005515
Phac10g00190 567 ProSiteProfiles TPR repeat profile. 487 520 IPR019734 GO:0005515
Phac10g00190 567 FunFam Peptidylprolyl isomerase 267 389 - -
Phac10g00190 567 MobiDBLite consensus disorder prediction 1 26 - -
Phac10g00190 567 Gene3D Tetratricopeptide repeat domain 390 547 IPR011990 GO:0005515
Phac10g00190 567 FunFam Peptidylprolyl isomerase 34 152 - -
Phac10g00190 567 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 61 149 IPR001179 GO:0003755
Phac10g00190 567 FunFam Peptidylprolyl isomerase 392 547 - -
Phac10g00190 567 Gene3D - 267 388 IPR046357 GO:0003755
Phac10g00190 567 PANTHER PEPTIDYLPROLYL ISOMERASE 36 150 - -
Phac10g00190 567 Coils Coil 520 540 - -
Phac10g00190 567 SMART tpr_5 487 520 IPR019734 GO:0005515
Phac10g00190 567 SMART tpr_5 404 437 IPR019734 GO:0005515
Phac10g00190 567 SMART tpr_5 453 486 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00190 Phac-Chr10 3273497 3278337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00190 1 561 Calmodulin-binding Proteins AT3G25230 79.679 0.0 886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00190 K09571 - gmx:100794411 957.977