Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3901 ATGGACGTGGCAGCCACCGCCGTCCTCCTCCTATCACCGCCGCCTTCTTCAATTACAACCGGATCCTGCCGCCTTCTTCACTTTCCTCCTTCTAATAATAAGGTGTGCGCTTCCGTCCCCATCCCTAGGCATAAGCATGAGAGACTCTCCGTTGGAATTGCTGCAAATACGATAACAAGAAGAAGAAGAAGAAGAAGCTTTGTAGTTAGAGCAGCAACATCCTCTTCCTCCTCGCCAGACCCAGACTCATCTCATAAGATTGCACCTCTTCAGTTTCAATCTCCAATCGGTCAGTTTCTTTCTCAGATTTTGATCAATCACCCCCATCTTGTGCCTGCTGCGGTGGACCAGCAACTTCTCCAGCTCCAATCTGATCGTGATGTTGCTCATCACCAACAAAACCAAGATCCTTCTCCTACCACATCCACCGATCTTGTTTTGTACAGGAGAATCGCTGAGGTCAAGGCAAATGAAAGGAGGACAGCTCTGGAAGAGATCTTGTACACATTGGTTGTGCAAAAGTTCATGGATGCTAATATCTCTTTGATACCCTCTATAACACCAGATGCATCTGGTAGGGTCGATTCATGGTCAAATGAAGATGGGAAACTTGAGCAGCTTCACTCGAACGAAGCATATGAGATGATCCAAAACCACTTGGCTCTCATTCTTGGTAACAGAGCAGGAGATCTATCCTCCGTTGCTCAAATTAGCAAACTGAGGGTAGGGCAGGTCTATGCAGCATCAGTGATGTATGGTTACTTTCTTAAGCGAGTTGACCAAAGGTTCCAGCTGGAGAAGTCGATGAAAGTTCTTACAAGTGCATCAGACGATAGTAGTATTCATCAAACTATTGTGGATGATGCAAGACCTGGTAGTGAAGTGGACACTTCCCAAGTGACATCTCATCCTGAAGTATCTACTTGGCCTGGCGGCGATGTCAGTCCTGGTGGATTTGGCTATGGTATAAAGCCGACCAGGTTGCGTAACTATGTGATGTCCTTTGACGGTGATACCCTCCAGAGATACGCAACAATAAGATCTAAGGAGGCCGTGAGCATTATTGAGAAGCACACAGAGGCATTGTTTGGAAGACCCGGAATGGTTATCACACATGAGGGGGGAATTGATTATTCAGAGGATGAAACCATCAAAATTAGCTTTGGTGGTTTAAGGAGACTTGTTTTAGAGGCTGTGACTTTTGGTTGTTTTCTCTGGGATGTTGAGAGCTACGTGGACTCGAGGTACCGTTTCGTCTTAAATTGA 1266 0.4605 MDVAATAVLLLSPPPSSITTGSCRLLHFPPSNNKVCASVPIPRHKHERLSVGIAANTITRRRRRRSFVVRAATSSSSSPDPDSSHKIAPLQFQSPIGQFLSQILINHPHLVPAAVDQQLLQLQSDRDVAHHQQNQDPSPTTSTDLVLYRRIAEVKANERRTALEEILYTLVVQKFMDANISLIPSITPDASGRVDSWSNEDGKLEQLHSNEAYEMIQNHLALILGNRAGDLSSVAQISKLRVGQVYAASVMYGYFLKRVDQRFQLEKSMKVLTSASDDSSIHQTIVDDARPGSEVDTSQVTSHPEVSTWPGGDVSPGGFGYGIKPTRLRNYVMSFDGDTLQRYATIRSKEAVSIIEKHTEALFGRPGMVITHEGGIDYSEDETIKISFGGLRRLVLEAVTFGCFLWDVESYVDSRYRFVLN* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3901 421 MobiDBLite consensus disorder prediction 294 308 - -
Mtr8g3901 421 Pfam Protein of unknown function (DUF760) 146 269 IPR008479 -
Mtr8g3901 421 PANTHER EXPRESSED PROTEIN 52 421 IPR038925 -
Mtr8g3901 421 PANTHER EXPRESSED PROTEIN 52 421 - -
Mtr8g3901 421 MobiDBLite consensus disorder prediction 66 86 - -
Mtr8g3901 421 MobiDBLite consensus disorder prediction 69 86 - -
Mtr8g3901 421 MobiDBLite consensus disorder prediction 288 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3901 Mtr-Chr8 49612032 49614096 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3901 - - gmx:100793300 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3901 8 49612032 49614096 Mtr8g3901 8 49612032 49614096 ECH
Mtr8g3901 8 49612032 49614096 Mtr6g1872 6 33994326 33999024 PCT