Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3891 ATGCCGCCCAAGTTGTTTCTCTCTCTTCTAACTTTCTCTCTCCTCACCCTCTCCGTCGCCGCTCGTCCCTACGTTCTCGTCCTTTCCCAGGAAGACTTCAAAGACGAAGTTCCCGCTGATTCCGATTCCTCTTCCGCCGAGTGGGATGAATTCGGCGACTCCGACTCCCACAAATCCGAAGAAGATCTCGATCCTGGCTCATGGCGCCAAATCTTCGAACCCTCCACCACCGACCCCCAATCCCAATCCCAATCCCAATCCCAATCCGATACCGACGCTCTCTACTACTCCGCCGTTACTAAGCTAATGACTGGGGATGCCAGGATCATAGAAGAGGGCTCCGGCGAGATTGAAACAGCTGCAGAATCTGGTCACCCGGCTGCACAATCAGTGTTAGGGTTTTTGTGGGGAATAGGTCTTTTCAGAGAGAGGAACAAACAGAAAGCATTTGTTTATCATCACTTTGCTTCAGAGGGTGGCAATATGCAATCCAAAATGGCTCTCGCTTATCTCTACACTCGTCAAGATATGTTTGATAAATCCGTTAAGCTTTATGCTGAATTGGCAGAAGTTGCTGTAAATAGTTTTCTCATTTCCAAAGATTCTCCTGTCATCGAACCTGTTAGGCTACACAATGGAGCTGAAGAGAACAAAGAAGCACTCAGAAAGTCTAAAGGGGAAGAGGATGAAGACTTTCAGATTCTTGAGTATCAGGCCCAGAAAGGGAATGCTGCTGCTATGTACAAAGTCGGTCTCTTTTACTACTTTGGCCTTCGTGGTTTGAGGCGTGACCATTCTAAGGCACTCTCATGGTTCCTTAAGGCCGTCGAGAAAGGAGAGCCTCGCTCTATGGAACTTCTTGGAGAGATATATGCCAGGGGAGCAGGTGTTGAGAGAAACTACACCAAAGCTTTTGAATGGCTTACTCTTGCATCCAAACACCACCTCTATTCTGCTTATAATGGCATCGGTTATTTGTACGTCAAAGGCTATGGAGTCGACAGCAAAAATTACACTAAAGCAAAGGAGTATTTTGAAAAGGCTGCTGATAACGAAGAGGTTGGAGGCCATTATAACCTGGGTGTCTTGTATCTCAAAGGGATTGGAGTGAAAAGAGATGTCAAGTTGGCATGTAAATTCTTTATTGTGGCTGCCAACCACGGTCAACCAAAGGCTTTCTACCAGCTCGCAAAGATTTTCCATCTTGGTGTTGGGTTTAAGAAGAACGTTCCATTGGCTACTGCCCTATACAAATTAGTTGCAGAAAGAGGTCCATGGAGTTCTTTGTCCAGATGGGCACTAGAAGCATACTTAAAAGGCGATGTTGGCAAGGCCTATATGTTGTACTCAAGAATGGCTGAGATGGGCTATGAGGTGGCACAGAGCAATGCTGCTTGGATTCTCGACAAATATGGAGAACGAAGCATGTGCATGGGTGAATCTGGATTTTGCACCGATGCAGAAAGGCATCAGCGGGCACATTCTTTGTGGTGGCAAGCTTCTGAGCAGGGTAATGAACACGCTGCTTTACTAATTGGAGATGCATATTACTATGGCCGGGGAACTGCCAGGGATTATGACCGAGCTGCTGAGGCTTACATGCATGCCAAATCACAATCTAATGCACAAGCCATGTTCAATCTTGGGTACATGCATGAGCATGGCCAAGGACTTCCTCTTGACCTTCATCTAGCCAAGCGTTACTATGATGAAGCTCTAGAGCATGATCCTGCAGCTAAGTTGCCAGTCACACTGGCTCTTACAAGCTTGTGGGTTCGGAAGAACCATGCTGACAGTTTATTGGTCCACATAATTGATTCTTTGCCGGGTGTCTATCCCAAATTAGAAGCTTGGGTAGAGAATGTGCTTTTGGAGGAGGGAAATGCAACAATTCTAACCCTCTTTGCGTGCCTCCTAACTGTGCTGTATCTGCGGGAGAGACAACGAAGGCAAGCTGTTGTTGTAGCTGGAGAGGTCGCTCAGCCAAATCGCCCTAATGAACTTGGTGTGCCTGCACCCATCTAG 2025 0.4701 MPPKLFLSLLTFSLLTLSVAARPYVLVLSQEDFKDEVPADSDSSSAEWDEFGDSDSHKSEEDLDPGSWRQIFEPSTTDPQSQSQSQSQSDTDALYYSAVTKLMTGDARIIEEGSGEIETAAESGHPAAQSVLGFLWGIGLFRERNKQKAFVYHHFASEGGNMQSKMALAYLYTRQDMFDKSVKLYAELAEVAVNSFLISKDSPVIEPVRLHNGAEENKEALRKSKGEEDEDFQILEYQAQKGNAAAMYKVGLFYYFGLRGLRRDHSKALSWFLKAVEKGEPRSMELLGEIYARGAGVERNYTKAFEWLTLASKHHLYSAYNGIGYLYVKGYGVDSKNYTKAKEYFEKAADNEEVGGHYNLGVLYLKGIGVKRDVKLACKFFIVAANHGQPKAFYQLAKIFHLGVGFKKNVPLATALYKLVAERGPWSSLSRWALEAYLKGDVGKAYMLYSRMAEMGYEVAQSNAAWILDKYGERSMCMGESGFCTDAERHQRAHSLWWQASEQGNEHAALLIGDAYYYGRGTARDYDRAAEAYMHAKSQSNAQAMFNLGYMHEHGQGLPLDLHLAKRYYDEALEHDPAAKLPVTLALTSLWVRKNHADSLLVHIIDSLPGVYPKLEAWVENVLLEEGNATILTLFACLLTVLYLRERQRRQAVVVAGEVAQPNRPNELGVPAPI* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3891 674 Gene3D Tetratricopeptide repeat domain 90 202 IPR011990 GO:0005515
Mtr8g3891 674 MobiDBLite consensus disorder prediction 35 90 - -
Mtr8g3891 674 Gene3D Tetratricopeptide repeat domain 319 429 IPR011990 GO:0005515
Mtr8g3891 674 SUPERFAMILY HCP-like 225 351 - -
Mtr8g3891 674 MobiDBLite consensus disorder prediction 50 67 - -
Mtr8g3891 674 PANTHER ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT HRD3A-RELATED 4 656 IPR044623 GO:0030433
Mtr8g3891 674 SUPERFAMILY HCP-like 336 465 - -
Mtr8g3891 674 SUPERFAMILY HCP-like 437 578 - -
Mtr8g3891 674 MobiDBLite consensus disorder prediction 70 90 - -
Mtr8g3891 674 SUPERFAMILY HCP-like 117 191 - -
Mtr8g3891 674 Gene3D Tetratricopeptide repeat domain 207 318 IPR011990 GO:0005515
Mtr8g3891 674 Pfam Sel1 repeat 357 388 IPR006597 -
Mtr8g3891 674 Pfam Sel1 repeat 244 279 IPR006597 -
Mtr8g3891 674 Pfam Sel1 repeat 439 457 IPR006597 -
Mtr8g3891 674 Pfam Sel1 repeat 542 576 IPR006597 -
Mtr8g3891 674 Pfam Sel1 repeat 126 161 IPR006597 -
Mtr8g3891 674 Pfam Sel1 repeat 282 314 IPR006597 -
Mtr8g3891 674 Pfam Sel1 repeat 508 530 IPR006597 -
Mtr8g3891 674 Pfam Sel1 repeat 318 351 IPR006597 -
Mtr8g3891 674 PANTHER ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT HRD3A-RELATED 4 656 - -
Mtr8g3891 674 Gene3D Tetratricopeptide repeat domain 430 594 IPR011990 GO:0005515
Mtr8g3891 674 SMART sel1 542 577 IPR006597 -
Mtr8g3891 674 SMART sel1 390 425 IPR006597 -
Mtr8g3891 674 SMART sel1 317 353 IPR006597 -
Mtr8g3891 674 SMART sel1 244 280 IPR006597 -
Mtr8g3891 674 SMART sel1 506 541 IPR006597 -
Mtr8g3891 674 SMART sel1 126 161 IPR006597 -
Mtr8g3891 674 SMART sel1 281 316 IPR006597 -
Mtr8g3891 674 SMART sel1 354 389 IPR006597 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3891 K14026 - gmx:100787823 1135.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3891 8 49521951 49528302 Mtr8g3891 8 49521951 49528302 ECH