Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3890 ATGGGAAGAAGTAAAAAGAAAAGGAATGAGTACGCGTTACATCAATTGGAAGATCTTCATTATTGTTCGGAAATGAAATTTAATATCATTGCGATTGTTATTGAAGCTGGTCTCCCAAAGTTCACCAAAGGCACGGATCAATGTTGTAACATTAGATTGATTGACGAAACACGTTACGAAACATCTATGTCTGTTAACTTGTTTTCTGACACTGCTCAAAGCCTTCCACATGTTCCTCCCGGTGACATCATTCTTCTTCGTAATGTTACCTCAAAACGACATGACCAGGAAGTAAATGCTGTTTTCTACAAAGACTCTTCTACTTTTGCCTTATATAAAGGGAAAGATACTGCTCTTGACGATTTTGACCCTTATCAACTTTTTTCAACAAATATTTTCCTCACACAACTGGACAAAATCCGCATTGTTAACCTTAGAAGATGGTTACCCAATTTTCAGATTCCTAAAGAACCATTTACTTTTTCTATGCTGAGAGAAATCAAAGAAGGTTACTTAAATTTGGCCTGCAAGATACTTCATTGCTCGGAGTCTACAAAAGATAATTGGTTTCTCTATGTTTGGGATGGTACAGATACCCCACCAAATGTATTATATACAATGCCTGAAGATGAAATTAATTCTACACGTACATTACATCCGGAGCCTATGCCTTTGCCAAGAGATATACTACGTACTTTCCCTACCGTTGGCTCAATCTTGAGGATTACTTTTGAACAACCAATAGAGGAAGATCATCTCCGTGTCCTTAACATTGATAAATGGGTCAAATTTGTCAACATACGTCTTAAAGTGTATGCAGGACTATGGTATGGCATTTTTACCTCACAATCAAAGATTCGATATACCTCAAATGTGGACCATCAAATTATCGAACGCCAAAGGTTGTATGATGAACGAATATCGTTGAAATCAGGAACAATTGCTATTGGCAGCTTACCTCAGTCTGAATCTTTACGTATTACAAAGGTTAATCACGATCATGTGCCGCAATGTACTTTGATGGATGTACTCACTCATTCAGAGGTCACAGCTAAATTCACGTGTGTTGTTCGGGTGGTAGCAGCAAAGCCATGGCAAGCTGAAAAGTTATGCTCTCCTACTAGTCAGTATATGACAAGACTGACCCTAGAGGATCCAACAGCTAGAATCCATGCTTTTGTAATTGGTGAAGATGGGGAGACTCTTTTTGATGGTTATCCGGGCATTGCAAATATGAAAAGGAAGTTAGACAGATTACTTGGAGTAACTGAATGTGGTGACGGTATTGTGGTAAAGGAGACCCCAAGAAATCCTCCATGGGTGATAGTTTGTATTAAATCATACTACACCTCCAAAACTGATGTATGGGGAAGTAGAACTTTTGGAATATTTGACACCAAAATAGTGGGTGAGCCTTGA 1419 0.3848 MGRSKKKRNEYALHQLEDLHYCSEMKFNIIAIVIEAGLPKFTKGTDQCCNIRLIDETRYETSMSVNLFSDTAQSLPHVPPGDIILLRNVTSKRHDQEVNAVFYKDSSTFALYKGKDTALDDFDPYQLFSTNIFLTQLDKIRIVNLRRWLPNFQIPKEPFTFSMLREIKEGYLNLACKILHCSESTKDNWFLYVWDGTDTPPNVLYTMPEDEINSTRTLHPEPMPLPRDILRTFPTVGSILRITFEQPIEEDHLRVLNIDKWVKFVNIRLKVYAGLWYGIFTSQSKIRYTSNVDHQIIERQRLYDERISLKSGTIAIGSLPQSESLRITKVNHDHVPQCTLMDVLTHSEVTAKFTCVVRVVAAKPWQAEKLCSPTSQYMTRLTLEDPTARIHAFVIGEDGETLFDGYPGIANMKRKLDRLLGVTECGDGIVVKETPRNPPWVIVCIKSYYTSKTDVWGSRTFGIFDTKIVGEP* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3890 472 Gene3D - 164 294 IPR012340 -
Mtr8g3890 472 Gene3D - 13 159 IPR012340 -
Mtr8g3890 472 CDD hPOT1_OB1_like 11 148 - -
Mtr8g3890 472 SUPERFAMILY Nucleic acid-binding proteins 15 153 IPR012340 -
Mtr8g3890 472 Pfam Telomeric single stranded DNA binding POT1/CDC13 24 149 IPR011564 GO:0000723|GO:0000781|GO:0003677
Mtr8g3890 472 SUPERFAMILY Nucleic acid-binding proteins 171 273 IPR012340 -
Mtr8g3890 472 PANTHER PROTECTION OF TELOMERES 1 6 469 IPR028389 GO:0000723|GO:0043047
Mtr8g3890 472 SMART Telo_bind_a_2 13 150 IPR011564 GO:0000723|GO:0000781|GO:0003677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3890 - - gmx:100800003 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3890 8 49513687 49516802 Mtr8g3890 8 49513687 49516802 ECH