Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3872 ATGGCGAATTGGATCTCTTCCAAACTTAAAGCCGCCGAGAACATTCTCCATCAGATCGATCAACAAGCGGCAGATTCGCTTCGTAAGAACAACGAGAGGCTTCAATTAGAGGAACAATCCAGTAGTATTGATGCTCCTCCCAAACCAGGTGTCCCTCTCAAGGATCAATTCAAGAAGAAGAAGAAGAATAACAATAATGGAAAACTGCACAGTGATCCCCTTAAAACTAAAACTACTACTGCACTACCCAAATCATCTAACCCTCCTCCTACCATTTCAGATGGTGATTGGACTCAACTTCTTAGTTCACCTTCTGCTTCTAACTCTTTGCCTGCACCTCGTATTTTAAGGCAAAATAGTAAGAAACTCAATAGTTTATCCGTTTCTGATATCAAGAGGAATCACAAAACTTCTTCAACATCTTTGCAGAGGTTAGACTCTCTTAAAGGAGATAATTTTATTGCCAAATCTAGTGATGATGGCAAGGAATCTACCTCTTCCGCTTCCACTGATAGGCAGTCAAATTTAGAAGAATCTGAAACTGACGCTAAATCTACCAGAGGACATTTATCTGTTAGTAATAACACTTCTGATAAGCCTTTGGCTGAGACCAAGGAAGATCATGTGCACCCATTAAATAACATAGATTTTTCTTCACCACCATTACTTCTGGAAGAGGACATAAATTTCGTTGCAGAGGCAATACCAGTAACGGGGGTTGATAAAGTCCGTGAAGCCAAGTTCCCTGTAGATGTTGGCTGTCAACTGAAAACTGTTATAAAAGGGAGGCGTGAGCTTAATTCAATGTCTGGCAATTCAACATCTAATGATTTGAAAACTGTTTCTTCTATGCCAATTGATGGAAGTTCTGATTCAGATACAGACTCCGGTTCAACATCTGATTCTGAAAGTGAACATGAGAGGGTAGAAAGGAGAAAGAAGAGAGAAAGGATCCTAGCTGAGAGAGCAGCGGCAAAAGCAATCAATGTTATCAAGGAAAAGGAGAATATGGTGGCCAAATTAGAGGGAGAGAAAGAAAGTCTAGAGAAAATACTTGAGGAGCGAGCTAAACAACAAGCACAAGAGGCTTCGCAGCTTCAGAGCACTATGATGGAAACAATGGAAGCTGTTGAGTTGGAAAAGCAAAAACATAATAATACCAGAATGGAAATTCTTACACGTTTAGCTAAACTGGAGACTGCTAATGCTGATCTTGCAAGATCCCTCACAGCTGTACAGTGGAACCTTGAAGTAGAGGTCAAACAAGTTGCAGAACTCAGACAAAAAATGGCATCAAAAGAGTCTGTTCATGAAGAGCTCAGAAGGAGCTTGAGGAATCCTAATCAAACTGGAGCTTCACGAAATCAACTAGCTTCAAAAGGAGTTGAGTTTGAACGAGAAATTCTTGAGGCAGAACACTCATTTATTAATGATAAAGTTGCACAATTACAGGAAAAGGCAAGGAAACTGGAAGCTGATATTGAAATGACAAGGAAGGAGATAGAAGAGCCAACGGAAGTTGAAGTTGAGCTCAAGCGTAGGCTCCATCAGATGACTGATCATTTAATACAGAAACAAGCTAAGGTTGAATCACTCTCATCTGAGAAGGCAAGCCTTATATTTCGAATTGAGGCAGTGTCGAGGTTGCTGGACGAGAACATGTCAGTCTCAGGTTCAACTGCTATGAATCCTGCCTCATCATCAAGTGACTTAGAATCTGGATTGTGGGAGCTCTCTAATTCAAAATTTAAGCCTATGCTAAAAGCCAGAATTCACTCTGGCAAGAAACAGCTGGGGTCATTGCTTCAACAAATAGATTATATTTTTGTGGCTGGTGCAGTTTTTCTGAAAAGGAACTCAACGGCAAAATTGTGGGCTTTGATTTACCTTGTTTGCCTTCATTTGTGGGTGATTTATATTCTGATGTCACATTCTAGCCCATCGGATGAGGGTAGATCTGGTGCCGTGATCTCATTGGAGAACATAAATAACACTGGAGTATGA 2004 0.4057 MANWISSKLKAAENILHQIDQQAADSLRKNNERLQLEEQSSSIDAPPKPGVPLKDQFKKKKKNNNNGKLHSDPLKTKTTTALPKSSNPPPTISDGDWTQLLSSPSASNSLPAPRILRQNSKKLNSLSVSDIKRNHKTSSTSLQRLDSLKGDNFIAKSSDDGKESTSSASTDRQSNLEESETDAKSTRGHLSVSNNTSDKPLAETKEDHVHPLNNIDFSSPPLLLEEDINFVAEAIPVTGVDKVREAKFPVDVGCQLKTVIKGRRELNSMSGNSTSNDLKTVSSMPIDGSSDSDTDSGSTSDSESEHERVERRKKRERILAERAAAKAINVIKEKENMVAKLEGEKESLEKILEERAKQQAQEASQLQSTMMETMEAVELEKQKHNNTRMEILTRLAKLETANADLARSLTAVQWNLEVEVKQVAELRQKMASKESVHEELRRSLRNPNQTGASRNQLASKGVEFEREILEAEHSFINDKVAQLQEKARKLEADIEMTRKEIEEPTEVEVELKRRLHQMTDHLIQKQAKVESLSSEKASLIFRIEAVSRLLDENMSVSGSTAMNPASSSSDLESGLWELSNSKFKPMLKARIHSGKKQLGSLLQQIDYIFVAGAVFLKRNSTAKLWALIYLVCLHLWVIYILMSHSSPSDEGRSGAVISLENINNTGV* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3872 667 Coils Coil 466 500 - -
Mtr8g3872 667 Coils Coil 423 443 - -
Mtr8g3872 667 Coils Coil 17 37 - -
Mtr8g3872 667 Pfam Golgin subfamily A member 5 421 644 IPR019177 GO:0007030
Mtr8g3872 667 PANTHER GOLGIN-84 1 663 IPR019177 GO:0007030
Mtr8g3872 667 MobiDBLite consensus disorder prediction 53 68 - -
Mtr8g3872 667 MobiDBLite consensus disorder prediction 69 118 - -
Mtr8g3872 667 MobiDBLite consensus disorder prediction 267 315 - -
Mtr8g3872 667 MobiDBLite consensus disorder prediction 433 457 - -
Mtr8g3872 667 MobiDBLite consensus disorder prediction 26 118 - -
Mtr8g3872 667 MobiDBLite consensus disorder prediction 299 315 - -
Mtr8g3872 667 Coils Coil 324 369 - -
Mtr8g3872 667 MobiDBLite consensus disorder prediction 153 213 - -
Mtr8g3872 667 MobiDBLite consensus disorder prediction 126 145 - -
Mtr8g3872 667 MobiDBLite consensus disorder prediction 267 297 - -
Mtr8g3872 667 MobiDBLite consensus disorder prediction 159 174 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3872 - - pvu:PHAVU_002G329100g 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3872 8 49358642 49366080 Mtr8g3872 8 49358642 49366080 ECH