Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3852 ATGATGGGAGAAGGAAGAAGCAGCAGCAGCAACAGCAACAGCAACGGTGATGTTCTGATGCTTGAAGCTCCACCTTCTTACGGTAGGTCTAGCCATTCCGATGCCGAAATCATCGACGCATTGCCTTACATCGACGACGATTACAGCGACCCAAGGGTTAAGATCGAAGTCGACCGTCTCGTTGAAGAAGAGATGCGCCGCAGCTCCAAAAAACCCGCGGATTTCCTTAAAGATTTTCCACCTCTTCCCTCTTCCAATTTTCATGATTATCCAATGATTGGTAGAGAATACGAGCGTGTAAGAGCTGGTAGGCCTCCTGTTTCTCTTGATAGGTCCAGATATGAATTAGAAGCTCCACCTGTTAATAAAAGGAACGATGAAACTGCTTGGAAACTTGCTATTCAACGAGCTCAACGACTTCTTCAATATCAAACCATCAGAATGGAAAATTTGGATTTGTTGTTTAAACATGGCCCTGATGCATGGAAACAGCACAATCAACGATTGGAAGTATACTTGTCAAGAATGCAGAAATTAGCTCAGGAACAAAATGATAAGATTGAAAAGGTTAACCGTGAAAGGAAATATCATCAGCAAAACACCGCTTATGAGCTTAATGCTTTGTCCATGCAATGGAATGAGCTCTGTCAGAAAAATATAGACATCAAAGTTGTGTGTGCTTCAGTTGAAACTCACTTAAATGAACTGAGAAGAGAAGCAGCAGAAAGAGGCTGGAACTTGGATGCTATCACTGAAAATGGCCAACTGGCAAATTCGGAATCATGA 786 0.4249 MMGEGRSSSSNSNSNGDVLMLEAPPSYGRSSHSDAEIIDALPYIDDDYSDPRVKIEVDRLVEEEMRRSSKKPADFLKDFPPLPSSNFHDYPMIGREYERVRAGRPPVSLDRSRYELEAPPVNKRNDETAWKLAIQRAQRLLQYQTIRMENLDLLFKHGPDAWKQHNQRLEVYLSRMQKLAQEQNDKIEKVNRERKYHQQNTAYELNALSMQWNELCQKNIDIKVVCASVETHLNELRREAAERGWNLDAITENGQLANSES* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3852 261 Coils Coil 173 200 - -
Mtr8g3852 261 MobiDBLite consensus disorder prediction 1 32 - -
Mtr8g3852 261 MobiDBLite consensus disorder prediction 1 19 - -
Mtr8g3852 261 PANTHER PRE-MRNA-SPLICING FACTOR SPF27 30 244 - -
Mtr8g3852 261 PANTHER BCAS2 PROTEIN 30 244 IPR008409 GO:0006397
Mtr8g3852 261 Pfam Breast carcinoma amplified sequence 2 (BCAS2) 36 242 IPR008409 GO:0006397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3852 K12861 - gmx:100777152 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3852 8 49192048 49199277 Mtr8g3852 8 49192048 49199277 ECH