Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3779 ATGGAAGAGTCTTGCAAAGCTTCTTCTTCTGAAATGAGCACCACAGTTGAGGAAGAAGAACAAGAGGGTCCTCCTCATGAAGCCATGTTTCTGGTGATAGCTTACCTTCGAGTGTACGAGGTTTTAACCATGTCTCGTGTTTGCACATCACTGAGATATGCAGTCAACAATGATGTATTGCTATGGCTTAAAATTATTGTTGAAACCCCTCTCAATTCAAGACTCTCAGATGACACACTATTGAAGATCACATCCAAAGCAAATGGTAGGCTTCAAACACTTGCTCTTATGAACTGCATCCACGTTGCTGACCATGGACTACAAAGGGTTGTTGAACAAAACCCCTTTATTGAAGAGCTTCATATACCAGCATGCACTGGGATAACCCCTGAAGGAGTTCTAACAGCTGTGAAAACACTCTGCCAAAGAGCCAACTGCTTAACCACCTTGAGTTTAAACGGCATTTACAACCTACAAAACGATCATCTTGACGTGCTTACCTCAAACCTCAGAAAAAACCTCCCATTAGAAGACGAGCTAACACAACAGCCTATCTACTATCATAAACGTGGCAGCGTTTCAGCATTCAAGCACAACGAAAATCAGAGGATTATTGATTTGGAGAAATGTCCCAAGTGCTTTGAGGTGAGAATGGTATATGATTGCCCAAAAGTGGACTGCAATAGGAAGGAATTGTGCCAAGCTCAATGTAGGGGATGCATATTTTGTATTCCAAGGTGTGAAAACTGTGGTGGATGTGTTGGATCAGAAGAACTTGAAGATGTTGCATGCGGAGATTTCTTGTGCCTTGAATGCTGGTTACAGCTTCCCAAGTGCAATTTCTGTAACAAACCATATTGTAAGCAGCACACAAATTGGTGGTGCACTTCTTCAGAGTCTTCATTTCTCTGCAGAGTTTGTGATGAAAATTCTCACGGATATACATACACTGATGTTCTATAA 963 0.4164 MEESCKASSSEMSTTVEEEEQEGPPHEAMFLVIAYLRVYEVLTMSRVCTSLRYAVNNDVLLWLKIIVETPLNSRLSDDTLLKITSKANGRLQTLALMNCIHVADHGLQRVVEQNPFIEELHIPACTGITPEGVLTAVKTLCQRANCLTTLSLNGIYNLQNDHLDVLTSNLRKNLPLEDELTQQPIYYHKRGSVSAFKHNENQRIIDLEKCPKCFEVRMVYDCPKVDCNRKELCQAQCRGCIFCIPRCENCGGCVGSEELEDVACGDFLCLECWLQLPKCNFCNKPYCKQHTNWWCTSSESSFLCRVCDENSHGYTYTDVL* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3779 320 SUPERFAMILY RNI-like 78 177 - -
Mtr8g3779 320 Pfam F-box domain 25 61 IPR001810 GO:0005515
Mtr8g3779 320 Gene3D Ribonuclease Inhibitor 70 238 IPR032675 -
Mtr8g3779 320 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 11 313 - -
Mtr8g3779 320 PANTHER F-BOX PROTEIN SKIP28 11 313 - -
Mtr8g3779 320 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 237 248 IPR017900 -
Mtr8g3779 320 SUPERFAMILY F-box domain 25 71 IPR036047 GO:0005515
Mtr8g3779 320 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3779 Mtr-Chr8 48366301 48368067 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3779 - - vra:106769044 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3779 8 48366301 48368067 Mtr8g3779 8 48366301 48368067 ECH