Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3754 ATGGCCGGAAAACAAGTTAGCGGCGAGGGTTTATCAGCGAACCTGGCTGGAATGTCGAAGAATCAACTTTACGATATAATGTCTCAGATGAAGAATTTGATCGAACAGAACCAGCAACAAGCCAAACAGATCCTCATCCAAAACCCTATGTTAACCAAAGCACTTTTCCAGGCGCAAATCATGCTTGGAATGGTGCAGTCGCAACAAGCGGTACCAAAAGTTCAACCAATAGCTCCTCAAAACAATCAGCAATCAGTACAGCCGACACAAAGACCAAGTGTTCAGCCTGCTCCAATATTGCCTGCACAAGGTGGCATACAAGATCAAGCAGGTGTATCTCAAACTCAAATTCCTCCCAGGAAACACCAAAATCAGCCTTCAGTGCCAGTTTCATATGCTGCTGTTCCTGCAACGAGTCATCAATCTCAACCCACAGCTGCACATTCGTTGCAAATGCCACAACAGCCTAAAGGGCATCTGACTCCCCAAGTAGCTCCAGCATCTGTTCCACAATCATCACAACTTCCACATATACCTCCACCCTCTGTTCATTCATCTTCACAGCCACTTCATCCAACTCAAATGCCAACTGCCTCGAGTCAGGCGCATCAACCATTGCAGACTCCTGGATTTTCACATATGCCTCTGCAACCACCATTGCCACCACAGCCCAGACCACCTTCAGTGCAAACCTTCCATCCCCAATATCCCCCACCGATTGGTGCCAATTTAGGTTTTCAACATGCTGGTGGTGCTTCTCACAACCTTCCTCCGCCCATGTTTCATGCTGGTGCAAAACCTCCTAGTGTTGGATCTACGTTCCCACCAGGGCAGGCACTACTACCAAGTCAACAATCATCTCAGTCATCTTATCAGGTTGGAAATATACCATTTGGGTCTGATTTCAGCAGTCAAGCTGGAAATGCAATGCAAATTGAAAGAGGGTCTTCTTGGATGCCTGGTCCCTCGGAGAATCTAGCACAGCATTCTGGTCCTCAGGGACCATCATCTATGGTTTCTGGTCAGATCGGTGCTGCTAATCAGCCTCCTCGGCCTCCTGCGTTGACACCAGATATGGAGAAGGCATTGCTTCAGCAGGTCATGAGTCTCACACCGGAGCAGATAAATCTCCTACCTCCGGAACAAAGAAATCAAGTGCTGCAACTGCAGCTGATGTTGCGTAAATGA 1188 0.479 MAGKQVSGEGLSANLAGMSKNQLYDIMSQMKNLIEQNQQQAKQILIQNPMLTKALFQAQIMLGMVQSQQAVPKVQPIAPQNNQQSVQPTQRPSVQPAPILPAQGGIQDQAGVSQTQIPPRKHQNQPSVPVSYAAVPATSHQSQPTAAHSLQMPQQPKGHLTPQVAPASVPQSSQLPHIPPPSVHSSSQPLHPTQMPTASSQAHQPLQTPGFSHMPLQPPLPPQPRPPSVQTFHPQYPPPIGANLGFQHAGGASHNLPPPMFHAGAKPPSVGSTFPPGQALLPSQQSSQSSYQVGNIPFGSDFSSQAGNAMQIERGSSWMPGPSENLAQHSGPQGPSSMVSGQIGAANQPPRPPALTPDMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQLMLRK* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3754 395 MobiDBLite consensus disorder prediction 265 293 - -
Mtr8g3754 395 MobiDBLite consensus disorder prediction 212 232 - -
Mtr8g3754 395 MobiDBLite consensus disorder prediction 80 232 - -
Mtr8g3754 395 MobiDBLite consensus disorder prediction 276 293 - -
Mtr8g3754 395 MobiDBLite consensus disorder prediction 187 211 - -
Mtr8g3754 395 Gene3D - 3 72 - -
Mtr8g3754 395 MobiDBLite consensus disorder prediction 321 344 - -
Mtr8g3754 395 Pfam Hinge domain of cleavage stimulation factor subunit 2 10 69 IPR025742 -
Mtr8g3754 395 MobiDBLite consensus disorder prediction 107 158 - -
Mtr8g3754 395 Coils Coil 27 47 - -
Mtr8g3754 395 Gene3D - 356 395 IPR038192 -
Mtr8g3754 395 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 395 - -
Mtr8g3754 395 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 395 - -
Mtr8g3754 395 Pfam Transcription termination and cleavage factor C-terminal 361 390 IPR026896 GO:0031124
Mtr8g3754 395 MobiDBLite consensus disorder prediction 314 356 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3754 - - lja:Lj4g3v3099310.1 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3754 8 48033441 48038966 Mtr8g3754 8 48033441 48038966 ECH