Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3747 ATGGGTCGGTCTGATCCAAGGAAGATTATATTTGCCGCAAAAATGGGTCTTGCTTTGACTATTATCTCCCTTTTGATTTTTCTCAAAGAACCCTTCAACAAAGATATTGGTCGTAACTCTGTTTGGGCTATTCTCACCGTTGTAGTTGTCTTTGAATTCAGTATAGGGGCAACTCTGAGCAAGGGGTTTAACAGAGGATTAGGGACATTGTCAGCTGGAGGACTTGCTGTTGGAGTGGGAGAGTTATCAGCATTGGCTGGAGAATGGGAAGAAATTATAGTTATTATCACTACATTCATTGTTGGATTCTGTGCTACTTATGCAAAACTCTATCCAACTTTAAAGCCTTATGAATATGGTTTCCGTGTGTTCTTGATCACTTATTGCTACATTACAGTATCTGGTTATCATACTGGTGAGTTTCTTGATACATCTATAAGTAGATTTTTGCTCATTGCACTTGGTGCTGCTGTCTCTTTGGGAGTCAATATCTGCATATATCCTATTTGGGCCGGAGAAGATTTGTATAATCTTGTGATAAAAAATTTCATGGGCGTTGCAACATCTCTAGAAGGGGTTGTCAATCACTACCTTCTGACTTACCAAGCAGCTGCTGATGACCCAGTTTACAGTGGCTACAGATCAGCAGTTGAATCTAAAAGTAACGAGGAAACATTGTTGGGATTTGCTGTATGGGAACCACCTCATGGTAAATACAAAATGCTTAAATATCCATGGAAGAATTATGTCAAAGTAAGCGAGGCTCTTAGGTATTGCGCGTTTGTGGTTATGGCCATGCATGGATGCATACTTTCTGAAATTCAGGCCCCGGCTGATAAGAGACAGGTTTTTCACAAAGAGCTTAAGAGGGTATGTTCCGAAGGAGCACAAGTGTTGCGCGAACTTGGAAACAAAGTCCAGAAGATGGAGAAGCTGGACAGGAGAGATTTGTTGCACAAAGTGCACGAGGCAGCCGAAGAATTGCAACTAAAGATCGATAAAAAATCTTACCTTCTTGTCAATTCAGAGCTCTGGGAAATTGGAAACCATTCTAGAGAGGAAACTAATGATGATCTTCCTGAAGGCCACATTAACATGGATGAAGACAAACAATTTCTAGAGTACAAGTCTCTAAGTGAAGCAGCACTTGATCTCAGATCAATTGAAGTTCAAAACAATTGGGATGAAATAACTAGAGATAATAATAGTAATAACCATGATGTGCCTCCTTCTATCGCCAATGAAAACATGTTCGTGAAACAAACATCTTGGCCTGCTCATGTTTACTACAAACCAGAAGTCAAAGCAAAAGAGGAAGTATCAAAAACTTATGAAAGTGCAAGTTCGTTGTCTCTAACGACATTTACATCACTATTGATTGAATTTGTAGCAAGGCTTCAAAATTTAGTGGATTCATTTGAAGAATTGGGTGAGAAAGCTAACTTTAAGGACCCCCTTGAACAACAAGGTGCCATAGCATCTGGCTGGTTTAGGAGGAGATTGTTTAACTGCTTTATATCCCAGGATTGA 1530 0.3974 MGRSDPRKIIFAAKMGLALTIISLLIFLKEPFNKDIGRNSVWAILTVVVVFEFSIGATLSKGFNRGLGTLSAGGLAVGVGELSALAGEWEEIIVIITTFIVGFCATYAKLYPTLKPYEYGFRVFLITYCYITVSGYHTGEFLDTSISRFLLIALGAAVSLGVNICIYPIWAGEDLYNLVIKNFMGVATSLEGVVNHYLLTYQAAADDPVYSGYRSAVESKSNEETLLGFAVWEPPHGKYKMLKYPWKNYVKVSEALRYCAFVVMAMHGCILSEIQAPADKRQVFHKELKRVCSEGAQVLRELGNKVQKMEKLDRRDLLHKVHEAAEELQLKIDKKSYLLVNSELWEIGNHSREETNDDLPEGHINMDEDKQFLEYKSLSEAALDLRSIEVQNNWDEITRDNNSNNHDVPPSIANENMFVKQTSWPAHVYYKPEVKAKEEVSKTYESASSLSLTTFTSLLIEFVARLQNLVDSFEELGEKANFKDPLEQQGAIASGWFRRRLFNCFISQD* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3747 509 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 508 - -
Mtr8g3747 509 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 1 508 - -
Mtr8g3747 509 Pfam Aluminium activated malate transporter 1 477 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3747 Mtr-Chr8 47961567 47965119 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3747 1 485 Miscellaneous Gene Families AT3G18440 61.914 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3747 - - gmx:100777792 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3747 8 47961567 47965119 Mtr6g2196 6 39216201 39221518 ECH
Mtr8g3747 8 47961567 47965119 Mtr8g3747 8 47961567 47965119 ECH
Mtr8g3747 8 47961567 47965119 Mtr6g2196 6 39216201 39221518 PCT