Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3742 ATGGAATCTCCGCCAAGTGGATCGGAGAGGGACACAACCAATTCTCCGATCTCCGTCGTCTCCGCTTTCTGGAAAGATTTTGACTTAGAGAAGGAGAAATCCGTGTTAGATGAACAAGGGCTTCGAATTGCAGAAAACCAAGAAAACAGTCAGAAAAATAGGCGGAAGCTTGCAGAGAGCACTAGAAATTTCAAGAAAGCTTCGCCCGAGGATAAGTCAAGTTTGTTTAATGCCTTGCTTAAGGGGTATCAGGAAGAGGTTGATAATCTTACAAAAAGAGCAAAGTTTGGAGAAAATGCTTTCCTTAACATCTATCAAAAGCTGTATGAAGCTCCAGATCCTTATCCAGCTCTTGCCTCAGTTGCTGAGCAAGATCTCAAGCTGTCCGAGCTAGAATCTGAGAACCGGAAAATGAAAGTCGAGCTTGAGGAATTTAGAACAGAGGCAACTCACTTGAAGAATCAGCAGGCCACAATACGAAGACTTGAAGAGCGAAGTAGGCAATTAGAGCAGCAGATGGAAGAGAAAGTAAAAGAAATCGTGGAGATAAAGCATCGCAATCTAGCAGAGGAGAACCAGAAAACATTAGAAATTTTAAAAGAAAGGGAACAATTACTACAGGACCAGCTGCAGAGTGCTAAAGAAAGTGTTTCAAATATGAAGAAATTGCACGAACTTGCACAAAACCAGTTGTTTGAACTCCGTGCCCAGTCTGAGGAAGAGAGGGCAGCTAAGCAAGCAGAGGCCAATCTCCTGATGGATGAAGTTGAACGAGCACAAACAATGCTTCTTGGTTTGGAGAGAGAGAAGGGGGTACTTCGATCTCAGTTGCAAACAGCAAATGAAGATTCTGAAACTAAGAAGAGTGATAATTTAGACTCAAATAATGCACTTGAGAATTCTTTAATTGCCAAAGAGAAGTTAATCTCTGAATTGAACATGGAGCTACACAATATTGAAACAACCTTATCAAATGAACGTGAAGAACACATTAATGATGTGAAAAAATTCACTGCAATGCTTAATGAAAAGGAGGCTTCTATTGTGGCAATGAAGAAAGAGCTTCAGACAAGACCAACAGAAAAAATAGTTGATGATTTGCGCAAGAAAGTAAAAATTTTGCAGGCAGTGGGTTATAATTCAATTGAGGCTGAAGACTGGGAAGTGGCCACAAGTGGGGAGGAGATGAGCAAGATGGAATCTCTACTACTTGATAAGAACCGAAAAATGGAACACGAGCTAACACAGTTGAAGGTCAAACTTTCTGAAAAAACATCTTCACTCGAAACAGCCGAGCAGAAGGTGGCAGAACTTTCAGCTAAGGTTAATGAACAACAAAAACTGATACAGAAGTTGGAAGATGATATATCCAAGGGATATAATTCCAGTTCCAAAGATCATAAAGGAACTTTCCTTGATGACTGGGATCTATCAGAGGCTAATCGGAGTGAGGTGTCTGAGAATATGGATCAAAGGCATGCCTTAGATCAAGATCAAAGCTCAATGCTTAAAGTAATATGTAGTCAGAGAGATCGATTTAGGACACGCTTGAGAGAGACAGAAGAGGAAATAAGGCAGTTGAAGGAGAAAATTGGGGTATTAACAGCGGAACTGGAAAAGACTAAAGCAGATAATGTTAAACTGTACGGGAAGATTCGTTATGTCCAAGACTATAATGTTGAGAAAGTGGTTTCCAGGGGTTCTAAGAAGTATGCAGAAGATCTTGAAAGTGGTTTCACATCAGATGTTGAATCAAAATACAAGAAGATATACGAGGAAGATATAAATCCTTTTGCTGCATTCTCAAAAAAGGAAAGAGATCAAAGATACAAGGAGTTGGGATTCAGGGACAGAATCACACTCAGCAGCGGACGATTTCTTCTCGGTAACAAGTATGCCCGAACTTTTGCATTCTTTTATACAATCGGGTTGCATGTCTTGGTCTTTACCTGTCTCTACCGAATGTCAGCTTTGAGTTATCTAAGTCATGGCTCAGATGAAACACTGGCTGGAGAGAGAACCATTGATCTTCCACGTGGACTGTAG 2046 0.4062 MESPPSGSERDTTNSPISVVSAFWKDFDLEKEKSVLDEQGLRIAENQENSQKNRRKLAESTRNFKKASPEDKSSLFNALLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPALASVAEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIRRLEERSRQLEQQMEEKVKEIVEIKHRNLAEENQKTLEILKEREQLLQDQLQSAKESVSNMKKLHELAQNQLFELRAQSEEERAAKQAEANLLMDEVERAQTMLLGLEREKGVLRSQLQTANEDSETKKSDNLDSNNALENSLIAKEKLISELNMELHNIETTLSNEREEHINDVKKFTAMLNEKEASIVAMKKELQTRPTEKIVDDLRKKVKILQAVGYNSIEAEDWEVATSGEEMSKMESLLLDKNRKMEHELTQLKVKLSEKTSSLETAEQKVAELSAKVNEQQKLIQKLEDDISKGYNSSSKDHKGTFLDDWDLSEANRSEVSENMDQRHALDQDQSSMLKVICSQRDRFRTRLRETEEEIRQLKEKIGVLTAELEKTKADNVKLYGKIRYVQDYNVEKVVSRGSKKYAEDLESGFTSDVESKYKKIYEEDINPFAAFSKKERDQRYKELGFRDRITLSSGRFLLGNKYARTFAFFYTIGLHVLVFTCLYRMSALSYLSHGSDETLAGERTIDLPRGL* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3742 681 Coils Coil 295 329 - -
Mtr8g3742 681 MobiDBLite consensus disorder prediction 48 69 - -
Mtr8g3742 681 Coils Coil 510 544 - -
Mtr8g3742 681 Coils Coil 121 186 - -
Mtr8g3742 681 Coils Coil 235 283 - -
Mtr8g3742 681 MobiDBLite consensus disorder prediction 42 69 - -
Mtr8g3742 681 Pfam CASP C terminal 430 658 IPR012955 GO:0006891|GO:0030173
Mtr8g3742 681 Coils Coil 414 455 - -
Mtr8g3742 681 Coils Coil 189 230 - -
Mtr8g3742 681 Coils Coil 80 100 - -
Mtr8g3742 681 PANTHER CCAAT DISPLACEMENT PROTEIN-RELATED 16 664 - -
Mtr8g3742 681 PANTHER HOMEOBOX PROTEIN CUT 16 664 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3742 K09313 - gmx:100780863 1118.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3742 8 47887053 47896418 Mtr8g3742 8 47887053 47896418 ECH