Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3660 ATGGCTGCTAGGTTCAGTTTCAGCTTCATCTTTGCGGCTTCATTGTTCCTCCTTCTTCTAGACTGTTGCTCAGGAAGTTTCATTGGGATCTGCTATGGAAGAAATGCAGATGACCTCCCGACACCCGACAAGGTGGCACAATTGGTTCAACTTCATAAAATCAAATATGTCCGGATTTATGATTCTAATGTACAGGTCCTAAGGGCCTTTGCAAAAACCGGAGTTGAACTTATGATTGGTGTTCCAAATTCAGATTTGCTCTCATTCTCTCAATTCCAATCTAACGCCGACGCTTGGATCAAAAACAGTGTCCTTCCTTACTATCCAGCCACAAAGGTCACATACATAACTGTTGGTGCTGAAGTCACAGAAAGTTCCTATAATACCTCTTCATTGGTAGTACCTGCAATGAACAATGTACTTACAGCACTCAAGAAACTCGGGCTTCACAAAAAGATAAAAGTTTCCAGTACTCATTCCCTTGGAGTTCTGTCACGATCGTTCCCTCCATCAGCTGGGGCTTTCAATAGCAGCCATGCACATTTCCTGAAGCCAATGCTAGAATTTCTTGCTGAAAATCAATCGCCTTTTATGATCGATATATATCCTTATTATGCTTACCGAGATTCACGGAATAAAGTGTCTTTGGACTATGCCCTTTTTCAGGCATCCTCTGAAGTTATTGATCCAAACACTGGTTTGTTGTACACAAACATGTTTGATGCACAGATTGATGCGATTTATTATGCACTCATGGCATTAAATTTCAGAACAATTAAGGTCATGGTCACGGAAACAGGTTGGCCTTCCAAAGGGTCGCCAAAGGAGAAGGCTGCAACTCCTGATAATGCACAAACATATAATACTAATCTCATAAGGCATGTTATAAATAATACGGGTACTCCTGCGAAGCTGGGACAGGAGCTAGATGTTTATATTTTCTCGTTGTTTAACGAAAATAGGAAGCCCGGTTTAGAATCAGAGAGGAACTGGGGATTATTTTACCCTGATCAGACAAGTGTCTATAATCTGGATTTCACCGGACGAGGTGCGGTTGATATGACTACGGCTGCAAATGTAACCCGGTCAAATCGCACAACATGGTGCATTGCTTCAAGCAAAGCCTCGGAAATTGACTTGCAGAATGCTTTGGATTGGGCTTGTGGTCCTGGTAATGTGGACTGTACTGCTGTCCAGCCTAGTCAGCCTTGTTTCGAACCGGACAATCTAGCTTCGCATGCATCCTATGTTTTTAATAGCTATTACCAGCAAAACGGGGCCTCTGATGTTGCTTGTAGTTTTGGGGGTACAGGTGTAAAAATTGACAAGGATCCAAGCTACGACAACTGCATCTACATGCGAGATGGCAATAACAAAACTTCGGGAGGTAACACAAGGGCGATGTCGTCAACTTCATCCTCCCAACAAAAAGGAATTTGTTACTCTTCAATTTCTATTTATCTTCTTGTAACTTGTCTCTTCATTCTATTGAATATTGAACAATCCTGA 1509 0.4201 MAARFSFSFIFAASLFLLLLDCCSGSFIGICYGRNADDLPTPDKVAQLVQLHKIKYVRIYDSNVQVLRAFAKTGVELMIGVPNSDLLSFSQFQSNADAWIKNSVLPYYPATKVTYITVGAEVTESSYNTSSLVVPAMNNVLTALKKLGLHKKIKVSSTHSLGVLSRSFPPSAGAFNSSHAHFLKPMLEFLAENQSPFMIDIYPYYAYRDSRNKVSLDYALFQASSEVIDPNTGLLYTNMFDAQIDAIYYALMALNFRTIKVMVTETGWPSKGSPKEKAATPDNAQTYNTNLIRHVINNTGTPAKLGQELDVYIFSLFNENRKPGLESERNWGLFYPDQTSVYNLDFTGRGAVDMTTAANVTRSNRTTWCIASSKASEIDLQNALDWACGPGNVDCTAVQPSQPCFEPDNLASHASYVFNSYYQQNGASDVACSFGGTGVKIDKDPSYDNCIYMRDGNNKTSGGNTRAMSSTSSSQQKGICYSSISIYLLVTCLFILLNIEQS* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3660 502 ProSitePatterns Glycosyl hydrolases family 17 signature. 259 272 IPR000490 GO:0004553|GO:0005975
Mtr8g3660 502 Pfam Glycosyl hydrolases family 17 28 346 IPR000490 GO:0004553|GO:0005975
Mtr8g3660 502 Gene3D Glycosidases 27 352 - -
Mtr8g3660 502 SUPERFAMILY (Trans)glycosidases 28 346 IPR017853 -
Mtr8g3660 502 Pfam X8 domain 367 438 IPR012946 -
Mtr8g3660 502 SMART X8_cls 367 452 IPR012946 -
Mtr8g3660 502 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 13 8 468 - -
Mtr8g3660 502 Gene3D - 361 478 - -
Mtr8g3660 502 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 8 468 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3660 Mtr-Chr8 47191925 47195466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3660 21 497 Glycoside Hydrolase AT5G56590 70.208 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3660 - - gmx:100794295 886.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3660 8 47191925 47195466 Mtr8g3660 8 47191925 47195466 ECH