Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3591 ATGGAATTGGAAGTTGTTGAGGATCAATTCTATGATACAAGGGAAGATTTGTGTTCTGTTTCTGATGATGGTTTTGATTATTGTTTAGAATCTTGTTCTGGTGGTAATATTATTAATAATAATGAACATGTTACTAGATTCAATGTTTGGATTAACAACCTTGATAGTGTTCACCGTAGAAGATTCAATTTTTTAAGATGGATGGGTTTAGAGTATGATGAGAATTCAGTTGAGGGAGATGAGTTTGGAGACGATCCATCTTGTGGAGTTGACCGAATAAGCAGGACTATGTTCAGAACTGTAGAGGGTTTTCCCTCAACCTCAAACCAGATTGTGTTAGATTCCTTGTCAAATGAAGCTTCTAGTTTGTTAGAAAATCGCGATGATGGTACGGAGAATTTGACATGTATGATAAAGAATTTGGATGATGGAACAGAATATGTTGTAGATAAATTGGATCAGGAGGGAAAACTTGATACTCTGCGTGTTCTGGGTTCGAACCAGTTGATTAGTTTCGAAGAGTTTCATAAAAATATTGGGCCGTCGTCGTTTGTTCGCCGACATCTGCAGAGAGATGCTGAAAGTACTAGATTGTTGAGTGTTGCCAAAAAGAAGATGAAGAAAGGGTGGTTAAGCAAACTGGATTCTATTGCTTGTTTTTATCACAATCAAGGGTTTGATGAAACTTGCTGCAACAAAGACTTTGATTCTAGGATACATAGAGTCCGTGTTCATCCGCATAAGAAGCGAGTTAAGGAGCTTTCGTCTCTTTACACTGAACAGGAGTTTAAAGCACACAAAGGCGTTATTTTGACGATGAAGTTTAGTCTTGATGGAAAATATTTGGCTAGTGGTGGTGAAGACGGCATTGTTCGTGTGTGGCAGGTGGTTGAGAATGAAAGATCAAATGAATTGAACATTCTGGACAATGATCCATCAAATATATATTTCAAAATGAATCAGTTTACTGGTTGTGTGGCTCCCCTTGACGTAGATAAAGATAAATTAGTTAAAACAGAGAAGTTGAGGAAATCATCTGCTTCAACTTGTGTAATCATCCCACCAAAGACCTTCCGCATATTGGTGAAACCTTTGCATGAATTCCAGGGGCATAGTGATGACATTTTAGACCTTGCATGGTCTAAATCAGGGTTTTTACTGTCATCCTCCGTTGATAAGACTGTGCGCCTATGGCAAGTAGGGATTAGCAAATGTCTTCGAGTTTTCTCTCACAATAATTATGTAACATGTGTGAATTTCAATCCCGTAAATGATAATTTTTTCATCAGTGGTTCAATTGATGGAAAGGTGCGCATCTGGGAAGTTGTTCGCTGTCGTGTTGTTGATTACATTGATATCAGAGAGATAGTCACAGCTGTATGCTTCTGCCCTAATGGACAGGGCACAATCGTGGGTACCATGACCGGCAATTGCCGTTTCTATAATATCCTAGATAATCATATGAAAATGGATGCTGAATTTTCGTTACAAGGCAAAAAGAAGACATCGGGGAAAAGGATCACTGGCTTTCAGTTTTCGCCCAGTGACCCGACCAAATTATTGGTTGCTTCTGCCGATTCACATGTCTGTATACTCTCTGGAGTTGATGTCATCTACAAATTCAAGGGTCTGAGAAGTGCAGGTCAGATGCATGCTTCCTTCACCTCTGACGGGAAACATATCGTTTCACTTAGTGAAGGTTCAAATGTTTGTATCTGGAATCACACTGGCCAGGATAGGAATACTTCCAAAGCAAAGAAGATTATGTCTTCTGAGAGTTTTCTATCCCACAATGCAACAATCGCCATACCTTGGTGTGGCATTGAGTCAACGCCGTTGTCTCCTTCACTCGGAGAAGAGTTGATTCAAAGGTCATCTTTGTCTTCTCCTGATTGTTTCTTCATGAGTCGCGGATTTCTTTCCGAGTTAGTCCCAAAGGTTTCTGCAACATGGCCTGAGGAGACGCTTCTTGACTCGGGTCAAACTGTTGTTTCTCCTACAATATGTAAATCAGAGTATAGGTTCTTGAGAAGTGCTTGCAAGGGAATGTCTAATTCTCACTTGTGGGGCCAAGTAATTGTAACAGCAGGATCTGATGGATTCATAAGAGTGTACCAAAATTATGGCTTACCCGTTCGTGTTTGA 2145 0.3995 MELEVVEDQFYDTREDLCSVSDDGFDYCLESCSGGNIINNNEHVTRFNVWINNLDSVHRRRFNFLRWMGLEYDENSVEGDEFGDDPSCGVDRISRTMFRTVEGFPSTSNQIVLDSLSNEASSLLENRDDGTENLTCMIKNLDDGTEYVVDKLDQEGKLDTLRVLGSNQLISFEEFHKNIGPSSFVRRHLQRDAESTRLLSVAKKKMKKGWLSKLDSIACFYHNQGFDETCCNKDFDSRIHRVRVHPHKKRVKELSSLYTEQEFKAHKGVILTMKFSLDGKYLASGGEDGIVRVWQVVENERSNELNILDNDPSNIYFKMNQFTGCVAPLDVDKDKLVKTEKLRKSSASTCVIIPPKTFRILVKPLHEFQGHSDDILDLAWSKSGFLLSSSVDKTVRLWQVGISKCLRVFSHNNYVTCVNFNPVNDNFFISGSIDGKVRIWEVVRCRVVDYIDIREIVTAVCFCPNGQGTIVGTMTGNCRFYNILDNHMKMDAEFSLQGKKKTSGKRITGFQFSPSDPTKLLVASADSHVCILSGVDVIYKFKGLRSAGQMHASFTSDGKHIVSLSEGSNVCIWNHTGQDRNTSKAKKIMSSESFLSHNATIAIPWCGIESTPLSPSLGEELIQRSSLSSPDCFFMSRGFLSELVPKVSATWPEETLLDSGQTVVSPTICKSEYRFLRSACKGMSNSHLWGQVIVTAGSDGFIRVYQNYGLPVRV* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3591 714 ProSiteProfiles Trp-Asp (WD) repeats profile. 408 442 IPR001680 GO:0005515
Mtr8g3591 714 Gene3D - 406 710 IPR015943 GO:0005515
Mtr8g3591 714 SMART WD40_4 361 399 IPR001680 GO:0005515
Mtr8g3591 714 SMART WD40_4 402 441 IPR001680 GO:0005515
Mtr8g3591 714 SMART WD40_4 256 295 IPR001680 GO:0005515
Mtr8g3591 714 SMART WD40_4 666 706 IPR001680 GO:0005515
Mtr8g3591 714 SMART WD40_4 489 533 IPR001680 GO:0005515
Mtr8g3591 714 SMART WD40_4 444 482 IPR001680 GO:0005515
Mtr8g3591 714 SMART WD40_4 534 574 IPR001680 GO:0005515
Mtr8g3591 714 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 408 442 - -
Mtr8g3591 714 PRINTS G protein beta WD-40 repeat signature 282 296 IPR020472 -
Mtr8g3591 714 PRINTS G protein beta WD-40 repeat signature 386 400 IPR020472 -
Mtr8g3591 714 PRINTS G protein beta WD-40 repeat signature 428 442 IPR020472 -
Mtr8g3591 714 Pfam WD domain, G-beta repeat 363 398 IPR001680 GO:0005515
Mtr8g3591 714 Pfam WD domain, G-beta repeat 404 440 IPR001680 GO:0005515
Mtr8g3591 714 Pfam WD domain, G-beta repeat 261 294 IPR001680 GO:0005515
Mtr8g3591 714 ProSiteProfiles Trp-Asp (WD) repeats profile. 263 304 IPR001680 GO:0005515
Mtr8g3591 714 PANTHER WD REPEAT DOMAIN 44 4 714 IPR040324 -
Mtr8g3591 714 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 4 714 - -
Mtr8g3591 714 Gene3D - 189 405 IPR015943 GO:0005515
Mtr8g3591 714 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 368 400 - -
Mtr8g3591 714 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 263 296 - -
Mtr8g3591 714 ProSiteProfiles Trp-Asp (WD) repeats profile. 368 408 IPR001680 GO:0005515
Mtr8g3591 714 Coils Coil 113 133 - -
Mtr8g3591 714 SUPERFAMILY WD40 repeat-like 257 705 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3591 Mtr-Chr8 46501301 46506010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3591 340 579 Miscellaneous Gene Families AT5G08390 25.188 3.68e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3591 - - gmx:100788374 1120.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3591 8 46501301 46506010 Mtr8g3591 8 46501301 46506010 ECH