Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3582 ATGGCGATCTCATCACAATCCTTCTCACCTTCCTTCATTTCAACCCCCAACGATTTAACTCGTCTCCCTTCCACCTTCACTCACTTCCGCAAAACCCAAACCCGATTCGCAGTTTCTTCCCGTCTCAACTCTTCTAAATCCTCCGATGCCGGTGGTTCAATCTCGCCGGAAAACGGCGGAGAAGTTCCCTATGAGCTTCACCACGATCTTTCTCCACAGCGTCGTAGACTCGGATCGCCGGTATTTGTGACGCTTCCGGTTAAATCTGTTGGTTTAGAGGGGAAGATTTGGAGGCCGAAAGCGATGATGCTGTCGTTGAAAGCGCTTGCTGCTGCTGGTGTAGAAGGTGTTGTGGTGGAGATTTGGTGGGGTGTTGTTGAAAGGAATCAGCCTAGGGTTTATGATTGGCGAGGGTATCGTGAACTTGTTATGATGGCTTGCATGTGTGGACTTAAAGTTCGCGCCGTTCTTGCGTTTCATCAACATGGCACTGATGGTGATGATCCTAATGGGATACCGCTTCCTCTATGGGTGCTTGATGAGATACAGAAAGATCCGGATTTAGCATTTTCTGACAGGTTTGGAAGAAGAAATATTGAATACATTTCCCTCGGGTGTGATATTCTTCCTGTGCTGCGTGGACGTTCTCCCATTCAAGCATATGCAGATTTTATGAGGGATTTTAGGGACACTTTTAGGCCATATCTAGGCTTTATCATCACAGGAGTGCAGATTGGCATGGGTCCTGGTGGTGAACTAAGATATCCTTCATTGTCTTCCCAAAAGCTAAATATGGCCTGGTCTCGTGAACTTGGAGAGTTTCAGTGCTATGATAAGTATATGCTTGCTTCTCTAAACGCCTCTGCAAGAAATATGGGAAAGCGTGAATGGGGAAATGGCGGTCCATTTGGCACTGGAAGTTTGACGAAAAATCCTGAGCGTTCTGAATTCTTTAGAAACGAGGGTGGCTCTTGGAACATGCCATATGGTAAATTTTTCCTTGAATGGTACTCGGATATGTTGCTTCTGCATGGAGAGAGAATTTGTAGAGAAGCTGAAACTATATTTAGGGGTACAGAAGTCCACATATCAGCAAAATTGGCTGCCATTCACTGGCACTATGTCACACAATCCCATCCATCAGAGTTAACAGCCGGCTACTATAATACTTTTAACAGGGATGGATACTTACCAATTCTACGCATCTTTAGTAAATACGGATTCTCGATGTGCTGCTCTTGTTTTGAAATGCAAGATGTAGTTATGAATAAGATCAACCCAGATTGCAGCCCTGAAGGTTTTCTTAGACAACTTTTGCTGGCTGCTAGGCTCTGTGACATATCACTTGAAGGTCAAAATTTTTCAACTGATTTGGATGATGATGGATTCACTCAAGTGCTGAAGATGTCAAAATTTTACTCAGATGGGATTGAGAGACGCCCATTCTCATTCAACTTTGTAAGAATGGACAAAAACATGTTTGAACCACGAAATTGGGACCGGTTTACTCGATTTGTGAGACGAATGTCTGCTGGAAACATGTTTCGAGCCAGATTAAATTCTGTAGGAAACCTACAATTGAAAACTACGGTGGCTGCAGAAGTGGGATTGTTATACCAGCTATACCAGTACTCTTGA 1638 0.4402 MAISSQSFSPSFISTPNDLTRLPSTFTHFRKTQTRFAVSSRLNSSKSSDAGGSISPENGGEVPYELHHDLSPQRRRLGSPVFVTLPVKSVGLEGKIWRPKAMMLSLKALAAAGVEGVVVEIWWGVVERNQPRVYDWRGYRELVMMACMCGLKVRAVLAFHQHGTDGDDPNGIPLPLWVLDEIQKDPDLAFSDRFGRRNIEYISLGCDILPVLRGRSPIQAYADFMRDFRDTFRPYLGFIITGVQIGMGPGGELRYPSLSSQKLNMAWSRELGEFQCYDKYMLASLNASARNMGKREWGNGGPFGTGSLTKNPERSEFFRNEGGSWNMPYGKFFLEWYSDMLLLHGERICREAETIFRGTEVHISAKLAAIHWHYVTQSHPSELTAGYYNTFNRDGYLPILRIFSKYGFSMCCSCFEMQDVVMNKINPDCSPEGFLRQLLLAARLCDISLEGQNFSTDLDDDGFTQVLKMSKFYSDGIERRPFSFNFVRMDKNMFEPRNWDRFTRFVRRMSAGNMFRARLNSVGNLQLKTTVAAEVGLLYQLYQYS* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3582 545 PANTHER - 8 531 IPR001554 GO:0000272|GO:0016161
Mtr8g3582 545 Gene3D Glycosidases 72 536 - -
Mtr8g3582 545 PANTHER BETA-AMYLASE 8 531 - -
Mtr8g3582 545 Pfam Glycosyl hydrolase family 14 82 505 IPR001554 GO:0000272|GO:0016161
Mtr8g3582 545 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 113 127 IPR001554 GO:0000272|GO:0016161
Mtr8g3582 545 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 134 152 IPR001554 GO:0000272|GO:0016161
Mtr8g3582 545 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 156 177 IPR001554 GO:0000272|GO:0016161
Mtr8g3582 545 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 248 270 IPR001554 GO:0000272|GO:0016161
Mtr8g3582 545 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 325 344 IPR001554 GO:0000272|GO:0016161
Mtr8g3582 545 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 361 377 IPR001554 GO:0000272|GO:0016161
Mtr8g3582 545 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 378 389 IPR001554 GO:0000272|GO:0016161
Mtr8g3582 545 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 396 419 IPR001554 GO:0000272|GO:0016161
Mtr8g3582 545 SUPERFAMILY (Trans)glycosidases 78 534 IPR017853 -
Mtr8g3582 545 MobiDBLite consensus disorder prediction 40 54 - -
Mtr8g3582 545 MobiDBLite consensus disorder prediction 40 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3582 Mtr-Chr8 46383451 46387016 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3582 25 516 Glycoside Hydrolase AT4G17090 45.766 6.49e-152 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3582 K01177 - gmx:100805981 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3582 8 46383451 46387016 Mtr8g3582 8 46383451 46387016 ECH