Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3577 ATGGCATCCTCTTTACTCAATTCAATTCCACTCTCATCTTCTTCTTATCTCTGCACTCCTCACACATGTTCACCATTTCGTGCATTTCCTGAATCAATTTCCCACTTTCACCAAAACAGGAACAACTTTTCCATTAAATCACAAACCCTAGACTTCTCTGGTTCTTTCTTTGAAGGTGGATTTGGTTCGGGTGATGACCCGGTTACTCCCGGAACCGGGTTCACTGCTGTGGAAGAGAAAGAAGAACCGCAATGTCCACCTGGACTCAGACAGTACGAAACCATGGTTGTTTTGAGGCCTGACATGTCTGAGGATGAGCGTCTTGCACTCACCCAGAAGTACGAGGAGCTTCTTGTTGCTGGAGGTGGCATGTATGTAGAGGTTTTTAACAGAGGTGTTATTCCACTAGCATATAACATCCAGAAGAAAAACAAGGAAGGAGAAACCAACACGTATATGGATGGCATCTACCTCCTATTCACCTACTTCACGAAGCCTGAGTCCATAACCGCCCTTGAGCAAACATTATTGAGGGATGATAATGTTATCCGATCAACAAGCTTCAAAATCAGAAAAAGGAAATGTTAG 588 0.4371 MASSLLNSIPLSSSSYLCTPHTCSPFRAFPESISHFHQNRNNFSIKSQTLDFSGSFFEGGFGSGDDPVTPGTGFTAVEEKEEPQCPPGLRQYETMVVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYNIQKKNKEGETNTYMDGIYLLFTYFTKPESITALEQTLLRDDNVIRSTSFKIRKRKC* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3577 195 Gene3D - 88 195 IPR014717 -
Mtr8g3577 195 Pfam Ribosomal protein S6 91 189 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Mtr8g3577 195 PANTHER 30S RIBOSOMAL PROTEIN S6 ALPHA, CHLOROPLASTIC 15 195 - -
Mtr8g3577 195 Hamap 30S ribosomal protein S6 [rpsF]. 89 192 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Mtr8g3577 195 CDD bS6_chloro_cyano 89 190 - -
Mtr8g3577 195 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 15 195 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Mtr8g3577 195 SUPERFAMILY Ribosomal protein S6 89 192 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3577 K02990 - gmx:100305490 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3577 8 46339070 46340419 Mtr8g3577 8 46339070 46340419 ECH