Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3576 ATGGCATGCATTGGCATGTTTAGTACATGTCCATTTGAGGTATCTTTGGTCCAGTATGAAGGGCTTAGAATGACACAAAAAATGCAAATGTTTTCAGCTGCATGCATGCCAAAAAGAAACATTTTAGCTTCAGCCAAGAAATGCAAAACAATCAAGGCCATGGCTTCTCCAACTGTTACAGCTCCTAAAAGAGAGAAAGATCCAAAAAAGAGAGTAGTAATAACAGGAATGGGTCTTGTGTCAGTCTTTGGGAGTGACATAGATACATTTTACACCAAGCTTCTAGAGGGAGAAAGTGGTATAAGCCTAATAGATAAGTTTGATGCCTCAAGCTTCCCCGTCCGTTTTGGTGGTCAGATACGCGATTTCTCTTCAAAAGGTTACATTGACGGCAAGACTGATCGGTGCCTCGATGATTGCATGAAATATTGTTTAGTTGCGGGAAAGAGGGCACTTGAAGATGCTAATCTTGGATATGAAACCCTTAACAATATGGACAAAACAAGAATAGGAGTTCTAGTAGGATCAGGAATGGGAGGTGTATCCACTTTTAACAATGCTGTCGATGCTCTCACTCGAAAGGGTCATAGGAAAATTTCTCCATTTTTCATTCCCTACACCATTCCTAACAGCAGTTCTGCTTTATTGGCTATAGAAACTGGCCTAATGGGACCAAATTATTCCATTTCTACTGCTTGTGCAACAGCAAATTACTGCTTTTGTGCAGCTTCTCATCACATTAGAAGTGGTGAAGTAGATATTATGGTGGTTGGTGGTACCGAAGCTTCACTTATACCTTCTGGTGTTGGAGCATTCATTGCTTGCAGGGCATTGTCTCAGAGGAATGAAGAGCCTAAGAAGGCTTCAAGACCATGGGACAAACACCGCGATGGCTTTGTCCTTGGCGAAGGCTCTGGTGTCCTGATAATGGAGAGCTTGGAGAGTGCAACAAAGAGGGGAGCAAGAATAATTGCTGAATATTTGGGTGGTGCCATAACATGTGATGCTCATCACATGACTGATCCTAGATCTGATGGACTAGGAGTATCATCTTGCATAAACAAGGGTTTAGAAGATGCTGGGGTTTCTCCTGAAGAGGTGAACTATGTGAATGCTCATGCCACATCCACACTAGCCGGTGACTTAGCTGAGGTTAATGCAATCAAACAAGTTTTTAAGGACACATCGGAATTGAAAATGAACGGGACTAAGTCAATGATTGGTCATTGTATTGGTGCTGCTGGTGCTTTGGAAGCTATAACAACCATCAAAGCAATAACAACTGGCTGGTTACATCCAACCATTAACCAAGATAACTTGGAGGAGGATGTTACAATTGACACTGTCCCTAATTTTAAAAAGAAGCATGAAGTTAATGTTGCTATCTCAAATTCATTTGGGTTTGGTGGACACAATTCTGTAGTTGTCTTCGCCCCATTCACACCCTAA 1449 0.4182 MACIGMFSTCPFEVSLVQYEGLRMTQKMQMFSAACMPKRNILASAKKCKTIKAMASPTVTAPKREKDPKKRVVITGMGLVSVFGSDIDTFYTKLLEGESGISLIDKFDASSFPVRFGGQIRDFSSKGYIDGKTDRCLDDCMKYCLVAGKRALEDANLGYETLNNMDKTRIGVLVGSGMGGVSTFNNAVDALTRKGHRKISPFFIPYTIPNSSSALLAIETGLMGPNYSISTACATANYCFCAASHHIRSGEVDIMVVGGTEASLIPSGVGAFIACRALSQRNEEPKKASRPWDKHRDGFVLGEGSGVLIMESLESATKRGARIIAEYLGGAITCDAHHMTDPRSDGLGVSSCINKGLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKQVFKDTSELKMNGTKSMIGHCIGAAGALEAITTIKAITTGWLHPTINQDNLEEDVTIDTVPNFKKKHEVNVAISNSFGFGGHNSVVVFAPFTP* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3576 482 Pfam Beta-ketoacyl synthase, N-terminal domain 70 316 IPR014030 -
Mtr8g3576 482 Gene3D - 34 481 IPR016039 GO:0016746
Mtr8g3576 482 SMART Beta-ketoacyl synthase 72 482 IPR020841 -
Mtr8g3576 482 ProSitePatterns Beta-ketoacyl synthases active site. 224 240 IPR018201 GO:0004315|GO:0006633
Mtr8g3576 482 PANTHER POLYKETIDE SYNTHASE-RELATED 34 482 IPR000794 -
Mtr8g3576 482 Pfam Beta-ketoacyl synthase, C-terminal domain 325 437 IPR014031 -
Mtr8g3576 482 SUPERFAMILY Thiolase-like 70 321 IPR016039 GO:0016746
Mtr8g3576 482 SUPERFAMILY Thiolase-like 284 478 IPR016039 GO:0016746
Mtr8g3576 482 CDD KAS_I_II 70 477 IPR000794 -
Mtr8g3576 482 PANTHER 3-OXOACYL-(ACYL CARRIER) SYNTHASE II 34 482 - -
Mtr8g3576 482 TIGRFAM fabF: beta-ketoacyl-acyl-carrier-protein synthase II 70 477 IPR017568 GO:0006633|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3576 Mtr-Chr8 46317668 46321238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3576 46 482 Acyl Lipid Metabolism Gene Families AT5G46290 70.419 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3576 K09458 - gmx:100808453 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3576 8 46317668 46321238 Mtr8g3576 8 46317668 46321238 ECH