Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3560 ATGGCTTCTGAGAGGGAAAGTTTTGACCTCTCAGGACCCTTGCATTTGACTTATGTTTTATGGGATAATCCATATCATCGAATGTCGGTTGCTGCTTGTTTGGTCCAAGCTGTTTACATTCTAGAAAGGGACCGGCAAGAAAATCGTGAAGGTTCGGATGCTCTCGCGCCGCCTTGGTGGACATTTTTCCATTTTCAGTTGCTTCGTCCACTTGTAGATGATGTTGATTCTTCAATCTTTGGTGCAATCTATGAGTTCAAGCCTCCATCATCACAATCTAATGATACTTTATATCGAAGTCCACGTTATGTGATTGCCTTTCGAGGAACTCTAACCAAAGCACACTCAGTTTCACGTGATGTTGAGTTAGATATCCATTTTATTCGACAGGGTCTTCATCAAACTTCACGCTCTAACATAGCTATTCAAGCTGTTCGAAACACGGTAGCAACCGTCGGTGATTCAAATGTTTGGTTAGCTGGACACTCCCTAGGCTCAGCAATGGCATTGCTTACCGGGAAAACCATGGCCAAGAATGGCAATTTTATTGAATCTTTTCTTTTCAACCCTCCATTTGTATCTGCTCCACTCGAGAAGATTAAGGATGAAAGAGTAAAACACGGGATTCGATTCGCTGGCAGCGTGATAACAGCTGGACTCACCTTAGCTATGAAAGCCAAGCAGCAACCTAAGGATTTAATCATCGATCCATTTACCGCTTTGTCTGCATGGGTCCCGTGTTTGTTTGTGAATCCATCTGACCATATATGTTCAGAGTATATTGGATACTTCGAACACAGGAGAAAAATGGAGGACATTGGCGCCGGAGTAATCGAAAGGTTAGCAACTCAAAACTCACTTGGTGGCCTATTGATGGGTGCGTTTGGGAAGGAATCTGAACCGTTGCACCTCATTCCTTCAGCTTCTGTGACAGTTAATGTTTCTCCTGCATCTGATTTCAAAGAAGCTCATGGGATTCATCAGTGGTGGCAACCTGACTTGCGCCTCGAATACAAGCTCTACAATTACAAATAG 1035 0.4348 MASERESFDLSGPLHLTYVLWDNPYHRMSVAACLVQAVYILERDRQENREGSDALAPPWWTFFHFQLLRPLVDDVDSSIFGAIYEFKPPSSQSNDTLYRSPRYVIAFRGTLTKAHSVSRDVELDIHFIRQGLHQTSRSNIAIQAVRNTVATVGDSNVWLAGHSLGSAMALLTGKTMAKNGNFIESFLFNPPFVSAPLEKIKDERVKHGIRFAGSVITAGLTLAMKAKQQPKDLIIDPFTALSAWVPCLFVNPSDHICSEYIGYFEHRRKMEDIGAGVIERLATQNSLGGLLMGAFGKESEPLHLIPSASVTVNVSPASDFKEAHGIHQWWQPDLRLEYKLYNYK* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3560 344 Pfam Lipase (class 3) 134 182 IPR002921 GO:0006629
Mtr8g3560 344 Gene3D alpha/beta hydrolase 62 210 IPR029058 -
Mtr8g3560 344 PANTHER LIPASE CLASS 3-LIKE 2 343 - -
Mtr8g3560 344 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 343 - -
Mtr8g3560 344 SUPERFAMILY alpha/beta-Hydrolases 18 236 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3560 Mtr-Chr8 46181016 46184577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3560 1 276 Acyl Lipid Metabolism Gene Families AT2G05260 59.649 8.63e-118 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3560 - - gmx:100812620 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3560 8 46181016 46184577 Mtr8g3560 8 46181016 46184577 ECH
Mtr5g0232 5 2128593 2131461 Mtr8g3560 8 46181016 46184577 PCT