Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3557 ATGATTCTAAATATATCAACACCTTCATTCTCTCGCATACTTCCTCACCCTTCTTCTTCTTTCAAACTCTCTGAAACTTATTCCAACCGCAACAACGCTTCTTATCCTGTTTTCATTTTCACAAAACCATTGAAATTCATCAACCTCAAAGCTTCCATAAGCGAAAGCCAAAATGAAACATCTAACTCTAACAACTTATTGGATCAACAGCTTCTTCTCCGAGTCGCCGCCACCGCCAAAGACGCCGACGAAGCATTGCAGTTAATCGCTGACAACTCTTCCACTAACGGTGGTGTTGTTTCTACTTCTGATTGTTGCTCTATTATTTCTGCTGCGCTTGAAAGGAATAATCCACAACTTGCTTTGTCTGTTTTTTACTCTATGCGCTCCACTTTTCATCAAGTTGGTGAGAGTGGTCCTTTAGTTGAGAGATGGAAGTGGTCGAGGCCAAATGCACGTGTTTATACATTGTTGATTCAGGGTTTGGCTGCATCTTTGAGGGTTTCGGATGCTCTTAGTGTGGTTAAATATATATGTGAGGTGGGCGTCTCTCCTTCTGAGGAGGTTCCCTTTGGGAAGATAGTGAGGTGTCCTACTTGTCGGATAGCTGTTGCAGTTGCACAGCCACAGCAAGGTATTCAGATAGTATCTTGTGCAAAGTGCCGCTACCAATATGAACTTGTTTCAGGAAACATAGTCAATATTCAATCAGAAGAAATCAGCATGGACATTACAGCATGGAAAAAGGGGTTAAGATTCCTGAAACTGATGAAGCAAAGCATTCCATCTGCTGTTCACTCTATTGTGGTGCAGACGCCTTCTGGTATGGCTCGTACTCACAGATTTGCAACTGAGACAGTTGATCTGCCAGCACAAGAAGGCGAAAGGGTAACTGTTGCCGTGGCAGCTCCATCAAATGTATATAGAAAGCTGGGCCCCATTAAATTAAGTTCAAGAGCCCCGGATTTATATCCTGGTGAAGCTATGTGCATAACAAACCACAAAGATGGACGGGAATCACGTCTTGTAAGAGCCCCCACAAAAGATGAAAATTCATCATTACTTAAACCCTCCATCCTCTTTCCACTTCTTGCTTTGTTTGCCACTGGTGACGCTGCTTCTGGACTTATTGACCCCAGCCTACCTCAATTCCTATCAGTTGTTGCAGTTTCATCTCTTGCTATTGGCTCTGCTTTGAACTCCTTTGTTTTTCCCCAGTTTAATCAGCTTCCGCAAAGATCGGTGGAAGTAACTGCTATCAAACAACGTCTTTTATCTCAATATGACATGCTTCAGTCTCGCATCAATGACTTAAAAGAAGCTGCTGAAAAAGAGGTTTGGATGTTAGCCCGGATGTGCCAGCTTGAGAATAAAATTTCAGCTGTTGGAGAACCTTCTTATCGGACTCGGATAAGTAAAGTCAAAAGGGTCCGAGAGAGCCTGCAAAATTCCCTCCAGGGACGAATTGAATTGATTGCCAGCTATGCTAGGATTTCCTCTATGATTGAAATTGAAGTGGAGATGGAAACTGATGTTCTTGCTGCTGAAACTACTAGTGATGTGGATGGGTTCACAGAACAGATAGAGCAAATCATGGAGCTTGAAAATTTAGAGGAGAGATGGAAAATGCAAGCAGAAGCAAATGATGAGGCCGAAAGACTTCTTAGCTCCCAGCCTGTGCCCTTGGACGAAGTTTAA 1698 0.4305 MILNISTPSFSRILPHPSSSFKLSETYSNRNNASYPVFIFTKPLKFINLKASISESQNETSNSNNLLDQQLLLRVAATAKDADEALQLIADNSSTNGGVVSTSDCCSIISAALERNNPQLALSVFYSMRSTFHQVGESGPLVERWKWSRPNARVYTLLIQGLAASLRVSDALSVVKYICEVGVSPSEEVPFGKIVRCPTCRIAVAVAQPQQGIQIVSCAKCRYQYELVSGNIVNIQSEEISMDITAWKKGLRFLKLMKQSIPSAVHSIVVQTPSGMARTHRFATETVDLPAQEGERVTVAVAAPSNVYRKLGPIKLSSRAPDLYPGEAMCITNHKDGRESRLVRAPTKDENSSLLKPSILFPLLALFATGDAASGLIDPSLPQFLSVVAVSSLAIGSALNSFVFPQFNQLPQRSVEVTAIKQRLLSQYDMLQSRINDLKEAAEKEVWMLARMCQLENKISAVGEPSYRTRISKVKRVRESLQNSLQGRIELIASYARISSMIEIEVEMETDVLAAETTSDVDGFTEQIEQIMELENLEERWKMQAEANDEAERLLSSQPVPLDEV* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3557 565 Coils Coil 421 441 - -
Mtr8g3557 565 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 151 185 IPR002885 -
Mtr8g3557 565 Gene3D Tetratricopeptide repeat domain 50 199 IPR011990 GO:0005515
Mtr8g3557 565 Coils Coil 534 554 - -
Mtr8g3557 565 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 564 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3557 - - gmx:100781803 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3557 8 46147924 46153846 Mtr8g3557 8 46147924 46153846 ECH