Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3531 ATGGTGAAACATCACTTGAGAAAGTCTATAAAATCCCTGTTTGAAAGTCACATTGACCCTGATAAAGAAGAGCAGCTCCAGGGAGCTAAAACAGAAATTGAAGACAAAGTCAAAAGGATATTGAAACTTATTAAAGATGACAACCTTGAAGAAGATGGTACCCCAGCAGAACTTTTGAAGAGGGAACCACTTGCTGAATTGATTGAGGATATCCACAATCAATACCAATTGATTTACACACAACATGATCATCTGACAGGTGAGTTAAAGAAAAGGATCAAAGGCAAGCGAGAAAAAGGAAGTTCTTCATCTAGCTCTGATTCAGATTCGGATTCGGATTATTCTTCAAAGGACAGAGGCAGCAAAAACGGTCAACTAGAAAATGAGTTTCAAAAGATAATTGATGGATTAAAGCAAGAACTTGAAGTGGCACATAAGGAAGCCGCTGACTTAAATCAGAAGTTGACAATTACACATGAAGAGAAGGATGACATAAATTCAAAACACCTTGCAGCACTGAGCAAGATACAAGAAGCAGACAAGGTTAGTATGGATTTGAAAACTGATGCCGAGGCATTTGGGATACAGATATCAAAACTTTTGGCTGAGAATACTGAACTAAATAAGCAACTGGACATTGCTGGTAAAGTAGAAGCTGAACTGAGTCAAAAATTGGAGGATATGAAGACAGAAAACAATAGCTTGGCCGTGGAGAAAGAGACAGCTCTTCACCAGATTGACGAGGAAAGGAAGACTGCAGATGACCTGAGAAACCTCGTTGATCAATTGAAAGATGATAAGTTAGTGATTGCAAAAGAATTACAAGCAGCAACAGATGAACTTTCTATTCTGAAGCAGCAATTGAAACATGCAGAACAACAAATAACAACAATAAGCCACAAGCTGGAGGTTACAGAGGAAGAAAATAAATCATTAAAAGCAGAAATTTCACAAGCTTCAAATGAGATTCAGCTGTCTCAGAACAGAATACAGGAATTTGAATCTGAATTAAGTCAGTTCAAGGAGAAACATGATGAGAAAGACAGGGAAGTTTCAACCCTCACTCAGATCCACGAAGGGCATAAGAATGAGTCCTCAAATCTTATCAGGGAACTAGAGACACAGATCACAAATCTGGGGCTGGAATTAGAATCACTGCAAAACGAGAAAAAAGATATGGAGGATCAACTTAAGAGCTGCACCACTGAAAAAAGAGAACTGGAAGAGCACAATTTAGGCTTGCGAAACCAAATTTCAGAACTTGAAATGAAGTCCAAAGAAAGAGAAGAGGAGCTATCTGCTATCATGAAGAAACTCAAAGATAGCGGGGATGAATCATCTTCCAAAATATCAGATTTGACATCTCAGATAAACAATTTGCAGGCTGATTTAAGCTCATTACATGCTCAGAAAACTGAACTGGAAGAACATATAATTCTTAAAAGTAATGAAGCCTCAACTCGAGTCGAAAGCATTACAAATGAGCTGAATGCATTACAGCAGGAAGTGGAGTCTCTACAACACCAGAAATCTGACTTGGAAGTTCAGCTTGTGGAAAAAAGCCAAGAAAATTCTGAGTGTTCAATTCAAATTCGAAGTCTGAAAGAGGAGGTTGACAGAAAATCCCTGGAACAAGAGAGACTTACGGAAGACAGAGAAAATTTTGCAAAAGAAAGAGAGGAGGAACTATCTGATATCATGAAGAAACTCAAAGATAATGAGAATGAATCATCTTCCAAAATATCAGATTTGACATCTCAGATAGACAATTTGTTGGCTGATATTAGTTCATTACATGCTCAGAAAAATGAACTGGAAGAGCAAATAATTTTTAAAAGTACTGAAGCCTCAACTCGAGCCGAAAGCATTACAAATGAGCTGAATGTGTTGCAGCAGGAAGTGGAGTCTCTACAACACCAGAAATTTGACTTGGAAGTTCAGCTTGTGGAAAAAAGCCAAGAAAATTCTAAGTGTTCAATTCAAATTCAAAGTCTGAAAGAGGAGGTTGACAGAAAATCCCTGGAACAAGAGAGACTTATGGAAGACAGAGAAAATTTTGCAAAAGAAAGAGAGGAGGAACTATCTGATATCATGAAGAAACTCAAAGATAATGAGAATGAATCATCTTCCAAAATATCAGATTTGACATCTCAGATAGACAATTTGTTGGCTGATATTAGCTCATTACATGCTCAGAAAAATGAACTGGAAGAGAAAATAATTTTTAAAAGTAATGAAGCCTCAACTCGAGTTGAAAGCATTACAAATGAGCTGAATGTATTGCAGCAGGAAGTGGAGTCTCTACAACACCAGAAATCTGACTTGGAAGTTCAGCTTGTGGAAAAAAGCCAAGAAAATTCCGAGTGTTCAATTCAAATTCAATGTCTGAAGGAGGAGTTTGACAGAAAATCCCTGGAACAAGAGAGACTTATGGAAGACAGAGAAAATTTAACCAGGCAGATAAAGAATCTGGAACTGGAGATGAGTACCATTAAGAGCAAAAATAGCAAAGACGAAGAGCAAATAAGGACCAACGTCCAAGTGATCAGTCATCTCCAGGATAAAATTCATATGGCAGAGATAGAAGGTTCAACCCAAATAGTTGCCTTTGGTGAGCAAATTAAGAATCTTCAACTTAATTTGGCACAAGAATTAGCGCAGCAGCGCAAAAAAATGGAGTTGGAGCTGGATTCCATACGCAGCCAGAAGAGTGAAGTTGAAGAACAATTAAGAGCCAAAGACCGTGAGTTAAACACTTTAGAGCAAAAAGAAAGTGAATACGCAAAGCAAATCAGTGCTAACCGGGATGAGATCAGTAAACTGGCACAGGAAAATTTGGAGCTAGCAGACAAAATAGATCATTCGGAGAGAAGATTAGCAACAAGAGAATTTGAGTTCTCTACACTTCAGGATAAACTTTATAAGGCAGAGGAAGAGGCTTCAGGAAAAACAATTGCCTTCACAGCTCAAGTTGACAATCTGCAAAAGGACTTGCTTTCCTTGCAGAAAACAAAAGAAGAATTGGAGCTCTGCTGTGACAATATCAAAGAAGAACACACAGAAGTCCTCAGAATGGTTGACAATGAAAAGAATGAATTAGCCTACAAAAACATGGATCTTCAGAGAACATTGGAAGAACAAGAAGATGCATATCAGAAGTTGAATGAAGAATATAAACAAATTGATAGTTGGTTTAATGAATGGAAGGTCAAACTTGAAGTTGCAGAGAGGAAAATGGAAGAAATGGCAGAAGAGTTTCGTGAAGGCATTGGGTCAAAAGATCAGATGGTAACTGATTTGGAAAACCAAGTTGAAGACCTGAAAAGAGACCTGGAAGAGAAAGGAGATGAGGTTAGCACTTTGTTTGAGAATGTCAGGAATCTTGAGGTAAAGCTTCGCCTGTCAAACCAAAAGCTCCGGGTTACAGAACAATTGCTAAGTGAAAAGGAAGAGAGCTTTAGAAAGGCGGAACGAGAGTTTCAGCAAGTTCAGAGAGAACTTGAAGACAGGATTGCTACTCTGGTAGCTACAATCACCGCTAACAATGAAGCTTTTCATGAAACTATCACAAGTGTTAAAGTGTGTGTCAACAGTGTGATATCTGGGATAGATACTTTGAGCCGGAAATTTTCCGACGAAAGCAAAAATCATGAGAACTACATATCAAACATCTCCCATGAGCTTCAGGTTGCAAAAGAATCTGTCAGCAAGATGAATAGGGTGAAGGGGCAGTTACAGAGAGATAAAGATTGTTTGTTAGAGGAACTGCAGGGTAAAAAGGAAGGGGAATTAACTCTGAGGGAAAAGGTTGAGAAGCTAGAGGTGAAGGCAAGAAAGGAGGAATCAGAGAAGATGAATGTGACAGCAACTGTTGTTGAACTTAAGAAGACAGTTGGAGAGCTAGAGAAGTCGATGAAAGAGAAAGAGGAAGGCATATTGGATTTGGGAGAGGAAAAGAGGGAGGCCATCAGGCAGCTCTGTTTGTGGATTGATTATCACCGTGAGAGTAGTGACCGTCTCAAGGAAATCATATCAAAGACACGCAGGGGCCAGAGAGCAGCATAA 4065 0.3877 MVKHHLRKSIKSLFESHIDPDKEEQLQGAKTEIEDKVKRILKLIKDDNLEEDGTPAELLKREPLAELIEDIHNQYQLIYTQHDHLTGELKKRIKGKREKGSSSSSSDSDSDSDYSSKDRGSKNGQLENEFQKIIDGLKQELEVAHKEAADLNQKLTITHEEKDDINSKHLAALSKIQEADKVSMDLKTDAEAFGIQISKLLAENTELNKQLDIAGKVEAELSQKLEDMKTENNSLAVEKETALHQIDEERKTADDLRNLVDQLKDDKLVIAKELQAATDELSILKQQLKHAEQQITTISHKLEVTEEENKSLKAEISQASNEIQLSQNRIQEFESELSQFKEKHDEKDREVSTLTQIHEGHKNESSNLIRELETQITNLGLELESLQNEKKDMEDQLKSCTTEKRELEEHNLGLRNQISELEMKSKEREEELSAIMKKLKDSGDESSSKISDLTSQINNLQADLSSLHAQKTELEEHIILKSNEASTRVESITNELNALQQEVESLQHQKSDLEVQLVEKSQENSECSIQIRSLKEEVDRKSLEQERLTEDRENFAKEREEELSDIMKKLKDNENESSSKISDLTSQIDNLLADISSLHAQKNELEEQIIFKSTEASTRAESITNELNVLQQEVESLQHQKFDLEVQLVEKSQENSKCSIQIQSLKEEVDRKSLEQERLMEDRENFAKEREEELSDIMKKLKDNENESSSKISDLTSQIDNLLADISSLHAQKNELEEKIIFKSNEASTRVESITNELNVLQQEVESLQHQKSDLEVQLVEKSQENSECSIQIQCLKEEFDRKSLEQERLMEDRENLTRQIKNLELEMSTIKSKNSKDEEQIRTNVQVISHLQDKIHMAEIEGSTQIVAFGEQIKNLQLNLAQELAQQRKKMELELDSIRSQKSEVEEQLRAKDRELNTLEQKESEYAKQISANRDEISKLAQENLELADKIDHSERRLATREFEFSTLQDKLYKAEEEASGKTIAFTAQVDNLQKDLLSLQKTKEELELCCDNIKEEHTEVLRMVDNEKNELAYKNMDLQRTLEEQEDAYQKLNEEYKQIDSWFNEWKVKLEVAERKMEEMAEEFREGIGSKDQMVTDLENQVEDLKRDLEEKGDEVSTLFENVRNLEVKLRLSNQKLRVTEQLLSEKEESFRKAEREFQQVQRELEDRIATLVATITANNEAFHETITSVKVCVNSVISGIDTLSRKFSDESKNHENYISNISHELQVAKESVSKMNRVKGQLQRDKDCLLEELQGKKEGELTLREKVEKLEVKARKEESEKMNVTATVVELKKTVGELEKSMKEKEEGILDLGEEKREAIRQLCLWIDYHRESSDRLKEIISKTRRGQRAA* 1355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3531 1354 Coils Coil 938 958 - -
Mtr8g3531 1354 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 89 IPR011684 GO:0003779
Mtr8g3531 1354 Coils Coil 450 477 - -
Mtr8g3531 1354 Coils Coil 553 608 - -
Mtr8g3531 1354 Pfam KIP1-like protein 14 83 IPR011684 GO:0003779
Mtr8g3531 1354 Coils Coil 362 438 - -
Mtr8g3531 1354 Coils Coil 134 154 - -
Mtr8g3531 1354 Coils Coil 991 1085 - -
Mtr8g3531 1354 Gene3D - 477 641 - -
Mtr8g3531 1354 Gene3D - 241 404 - -
Mtr8g3531 1354 PANTHER COP1-INTERACTIVE PROTEIN 1 684 855 - -
Mtr8g3531 1354 PANTHER COP1-INTERACTIVE PROTEIN 1 902 1353 - -
Mtr8g3531 1354 PANTHER COP1-INTERACTIVE PROTEIN 1 1 554 - -
Mtr8g3531 1354 PANTHER COP1-INTERACTIVE PROTEIN 1 553 685 - -
Mtr8g3531 1354 Coils Coil 1263 1311 - -
Mtr8g3531 1354 MobiDBLite consensus disorder prediction 111 125 - -
Mtr8g3531 1354 Coils Coil 218 350 - -
Mtr8g3531 1354 Coils Coil 1139 1173 - -
Mtr8g3531 1354 Coils Coil 613 682 - -
Mtr8g3531 1354 Coils Coil 882 930 - -
Mtr8g3531 1354 Coils Coil 684 841 - -
Mtr8g3531 1354 Coils Coil 482 551 - -
Mtr8g3531 1354 MobiDBLite consensus disorder prediction 90 104 - -
Mtr8g3531 1354 Coils Coil 1090 1124 - -
Mtr8g3531 1354 MobiDBLite consensus disorder prediction 90 126 - -
Mtr8g3531 1354 PANTHER COP1-INTERACTIVE PROTEIN 1 553 685 - -
Mtr8g3531 1354 PANTHER COP1-INTERACTIVE PROTEIN 1 1 554 - -
Mtr8g3531 1354 PANTHER COP1-INTERACTIVE PROTEIN 1 902 1353 - -
Mtr8g3531 1354 PANTHER COP1-INTERACTIVE PROTEIN 1 684 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3531 Mtr-Chr8 45929805 45937645 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3531 - - cam:101509420 1545.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3531 8 45929805 45937645 Mtr8g3531 8 45929805 45937645 ECH