LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr8g3530	ATGATAAATCACAACTCAATGGAATCAATTGAGATCATTGTCGAAATTGATCCTGAAAATGCTGAAGAACTCAAAAAGACTAAAACAGGCATTGAAACCAAGATCACAAAAATCCAGAAGCTTATTAAGAACGAAAACCAAAGCAAAAAAGATGCGAGTCCTAGACGTTCTAGAAAAGATACAGAACTTATGGGATTAACGGAGGACTTATACAAGCAGTACCAGTCACTTAATGCACAATATGATAATCTCATTGGGAAAGTGGTTTCTAACCAAAGAAAAGATTTAATGTTTTCATCTGACTCAGACTCGGAGTACTTTTCCTCAAAGGAAGAACAAAAAGTAGCGGACACTGTTAAGCAGGAATCTGATACAGGTGATAATAGAGAGGTGACAGATCTTAGCCAAAATATTGGCAATACCAATCAAGTTCTTAAGACTGAAGCATCAGTTGAGGCAACCGAAATTGAAAGAAAATTAACTTCACTAATGGAAGAGATGAGGAGCTTGAGCAACGATAAAACGAATCTAGAACTTCAAATTGAAAGCCAAGCAAATGAAGTTAAACAACTAAGCATACAAAATACTGAGCTACAGAATCATGTCATGGAACTTGAGTCGTTGTTGAAAGAGAAACAAGGTGTGGTATCTGATCTGGAGATGAAACTCAACAACAGCGAGGAACAAGCAAAATCCAACATTGTAATATTGATGGCACAAGTCAACGAACTTGTACTTGAGACCGAATCTCTGAGGACCCAAAAAGATGAGATGGAAGAAAAAATAAAATGTGATCAAAATGAAGCGTCTATGCAAAGAGATGACTTGATGGAGAAGCTTAACGTTATGCAACAAAAGTTAGATTCTATAGAGAATCATAACAAAGAATTAGAAGCTCAGTTGGAAAGAAAAGCAGAAGAAATATCCCAGTTCCTAATTCAGATGGAAAATTTAAAGGAGAATTTAGCCGAAATGAAATCAACCGAACATACTATGATGGAAGAGAAAGAGGGTTTTCTTGCGCGGTTAAAGGAAATGGAATTCAAATTGGAAACACAAAGCAACCAGAAAAGTGAGTTGCAAGAGGAGTTAGCTGAAATGAGATCTACTGAACAAACTATGATGGAAGAGAAAGAAGGTTTTCTTGCGAGGTTAAAGAACATGGAACTCGAATTGGAAACTCAAATCAATCAGAGAAATGAGTTGGAAGAGCAGTTAAGAGATACAAATTATGAGATTAAACAACTGATGAATGAAAATAAGGCCCTGCAGGATAGAAACCATGAACTGAAAGCAGCAATGATACAAAGAGGTGAAGAGATATCAAATTTTTTAAAGGAAAACGATAGCGATGAAAATGGAGCTTCAATTGAGATTATGGCTTTAAAAGCTGAAGTTAATGACATGAGGCTAGCGTTGGACAATTTGCAGGAACATAAAACCAAGTTGGAACTCCAGAATGAGCGAAACCAGAAGGAATATGCAGAAAGCTTAGCAAAGATAGAAACTTTGAACACAAAGTTGACAGGCCAGATAGCTGATCAAGAGAAAACTATAAAGGATCAGACATCAACCATTGACCGAATAAATGCGGAGCAAAAACAAACCATAATCACCTCGAATAAACTTATGTTGAATCAGCGATCGACAGAAAGGAAAATGGAAGAATTGGCAGAAAAGTTGAGGAAGAAAATGGAAGACAATATCCGCTTGTTGCACCAGAGGATCCACGTAGCAGAACAATTGAACAATGAGAACAAAAGCAGTTGCAAATTAACAAAGATAAGGTACGAGGAAGAGAACAAGATTCTTGGGGAGAAAGTTTCTATTTATGAAGAGGAACTAAGAAGGCTTAAAGAGGGTGCTGCTAATGTTACTGCAAATGCAAGTGAGGAAACACACTCACCAGTGGTTGATCTAAAGGGTTTTGAATTTGATGCTGCTCTAAATGGATTAGATGTAGTGGCTGCGAAAGTCGAGGAACACAGAGAGTGTGTCATGAGCAATGTGTCTAAAATGCTTTGTGAGGTTCAGTTTGCGAAGGATTGGATAAAGAAAATGAACGTCGAAATGAAACAATTGAAGGAAAATGTGGATTGTCTTACAACGCTACTGAGCGAAAAAGAAGAGCAGGAATTGTTGTTAAGAGACAAAGTATGGAATTTAGAAGCCACAGTGAGCAAAGAAGGAGGAGAGAAATTGAACTTGACAAATGCAGTGAGCCAGCTTGAAAAGAAAGTGGGGAAAATGGAAAAGAATCTGAAAGAAAAGGATGAGGATTTGGATAGCCTTGGGGAGAAGAAGAGGGAAGCAATAAGACAGCTTTGTTTGGTTGTTGAGTTTCATCGCGACCGGTGTAACTATCTAATGAATTTGGTCACAAGTATGAGAGTTAATAAGAAGACATGA	2409	0.3744	MINHNSMESIEIIVEIDPENAEELKKTKTGIETKITKIQKLIKNENQSKKDASPRRSRKDTELMGLTEDLYKQYQSLNAQYDNLIGKVVSNQRKDLMFSSDSDSEYFSSKEEQKVADTVKQESDTGDNREVTDLSQNIGNTNQVLKTEASVEATEIERKLTSLMEEMRSLSNDKTNLELQIESQANEVKQLSIQNTELQNHVMELESLLKEKQGVVSDLEMKLNNSEEQAKSNIVILMAQVNELVLETESLRTQKDEMEEKIKCDQNEASMQRDDLMEKLNVMQQKLDSIENHNKELEAQLERKAEEISQFLIQMENLKENLAEMKSTEHTMMEEKEGFLARLKEMEFKLETQSNQKSELQEELAEMRSTEQTMMEEKEGFLARLKNMELELETQINQRNELEEQLRDTNYEIKQLMNENKALQDRNHELKAAMIQRGEEISNFLKENDSDENGASIEIMALKAEVNDMRLALDNLQEHKTKLELQNERNQKEYAESLAKIETLNTKLTGQIADQEKTIKDQTSTIDRINAEQKQTIITSNKLMLNQRSTERKMEELAEKLRKKMEDNIRLLHQRIHVAEQLNNENKSSCKLTKIRYEEENKILGEKVSIYEEELRRLKEGAANVTANASEETHSPVVDLKGFEFDAALNGLDVVAAKVEEHRECVMSNVSKMLCEVQFAKDWIKKMNVEMKQLKENVDCLTTLLSEKEEQELLLRDKVWNLEATVSKEGGEKLNLTNAVSQLEKKVGKMEKNLKEKDEDLDSLGEKKREAIRQLCLVVEFHRDRCNYLMNLVTSMRVNKKT*	803

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr8g3530	802	Coils	Coil	684	711	-	-
	Mtr8g3530	802	Coils	Coil	512	532	-	-
	Mtr8g3530	802	Coils	Coil	594	628	-	-
	Mtr8g3530	802	ProSiteProfiles	Networked (NET) actin-binding (NAB) domain profile.	5	88	IPR011684	GO:0003779
	Mtr8g3530	802	MobiDBLite	consensus disorder prediction	105	129	-	-
	Mtr8g3530	802	PANTHER	MYOSIN HEAVY CHAIN-LIKE PROTEIN	26	364	-	-
	Mtr8g3530	802	PANTHER	MYOSIN HEAVY CHAIN-LIKE PROTEIN	359	801	-	-
	Mtr8g3530	802	Coils	Coil	343	433	-	-
	Mtr8g3530	802	Coils	Coil	540	582	-	-
	Mtr8g3530	802	Coils	Coil	459	507	-	-
	Mtr8g3530	802	MobiDBLite	consensus disorder prediction	42	62	-	-
	Mtr8g3530	802	Coils	Coil	146	229	-	-
	Mtr8g3530	802	Pfam	KIP1-like protein	16	82	IPR011684	GO:0003779
	Mtr8g3530	802	Coils	Coil	733	774	-	-
	Mtr8g3530	802	MobiDBLite	consensus disorder prediction	43	62	-	-
	Mtr8g3530	802	MobiDBLite	consensus disorder prediction	100	135	-	-
	Mtr8g3530	802	Coils	Coil	241	335	-	-
	Mtr8g3530	802	PANTHER	COP1-INTERACTIVE PROTEIN 1	26	364	-	-
	Mtr8g3530	802	PANTHER	COP1-INTERACTIVE PROTEIN 1	359	801	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr8g3530	Mtr-Chr8	45920744	45923839	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr8g3530	-		-	mtr:MTR_8g099265	1513.43

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr8g3530	8	45920744	45923839	Mtr8g3530	8	45920744	45923839	ECH